Carya illinoinensis (pecan): 122312903
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Entry
122312903 CDS
T08745
Name
(RefSeq) KH domain-containing protein HEN4 isoform X1
KO
K21444
poly(rC)-binding protein 3/4
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122312903
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122312903
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KH_1
KH-I_KHDC4-BBP
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
122312903
NCBI-ProteinID:
XP_042983510
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All DBs
Position
1:19922182..19934575
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AA seq
676 aa
AA seq
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MDASPVIPKSSSDPTTSLTMEPAAKRRHVPSETSLFRVLCPTTKAASLTSLIRHLQTLTG
TKIHINSFSSSSVEDECVIHIISNSNNHKDRVSTATCEEEEENKEDEEDNEGCSPAQQAL
LRIFDRMVRVSGDEKEKLKENDREWDGLNSREVFSCRLLVASSQVGCVLGRGGKIVEKIR
HESGAQVRVLSKDHLPPCASAGDELILLTGNFSAVKKALLSVSSCLQDNPRVDTTNSGST
KPSLGVLYGTSLLPHVDPFPHRGFSSSLHAGDYHLRGYYSFSGPENTGAGNRMFLEEEVI
FKLLCQLEKVGSLIGKGGCIIRALQSETGASIKIADAACDSDERVVVISARENSEQKHSP
AQEAVIQVHCRIAQIGLEPGAAVVARLLVHSQQIGCLLGKGGFIITEMRRATGASIRIFP
KEQVPKCGYPNDEVVQVIGSFQSVQDALFHITSRLRETILPMNPLSPNFGAPPYLPRFPE
MPPFFRPRHNPASPRNYPSPVGHSHGHDRSAIPSQPPDYPSSFSHGTDRSGPSNGDRVPY
PCGSERPGHCSTFDRPSSSPRPWNPQTISSGNHRGTSDVFGLASKNGPHRSSGSQAPIPT
STNIEITIPETCLGHVRGENNSHLTQIQQSSGAKVLIHDLKPGATEGVVIVSGTPKQTHA
AQSLIQAFIFCGQTQP
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttcccccgtcattcccaagagttcgtcggaccccaccaccagcctcaccatg
gagcccgccgccaagcgccgccacgtaccaagtgaaaccagtctcttccgcgtcctctgc
cctacaaccaaagccgcatctctcaccagtctcatccgccacctccaaaccctcaccggc
accaagatccacatcaactcattttccagctcttccgtcgaagacgagtgcgtcatccac
ataatctccaactccaacaatcacaaagatagggttagcaccgccacttgcgaggaggag
gaggagaacaaggaggatgaggaggacaacgagggttgctcaccagctcagcaggcgctg
ctgagaattttcgacaggatggtgagggtgtctggtgatgaaaaggagaaattgaaggag
aatgatcgggagtgggatggattgaatagtcgtgaagtatttagttgtaggttgctggtg
gcgagtagtcaggtaggttgcgtgctaggtaggggaggtaagattgtggagaagatacga
cacgagagtggggcccaagttagggttttatccaaggatcatcttccgccctgtgcgtcc
gcgggtgacgagttgattctgttaacagggaacttctcagccgtaaagaaagcactcctg
tctgtttctagctgtcttcaggataaccctagggttgacacaaccaactctggttctact
aaaccttcattgggcgtgctatacggaacttccctgctaccacatgttgacccttttcct
caccggggtttttcatctagccttcatgctggagattatcatttgaggggttattattca
ttttcaggacctgaaaatactggtgctggtaacagaatgtttcttgaagaagaggtgata
tttaaattgttatgccaacttgagaaagttggtagtctaattgggaaaggtggctgtata
ataagggctttgcaaagtgaaactggtgcgtctatcaagatcgctgatgctgcttgtgat
tcggatgaacgggttgttgtgatatcagcacgagagaattctgagcagaaacattctcca
gcacaggaagctgttattcaagtgcattgtagaattgcacaaattgggttggaacctggt
gctgctgttgttgctaggcttcttgtacattcgcagcagataggttgtttactggggaaa
ggcggtttcattatcactgaaatgagaagagctactggtgctagtatacgcatttttcca
aaagaacaggttccaaagtgtggttatccaaatgatgaagttgtacaggttattggaagc
tttcaatccgtacaagatgctttgtttcacataacaagcaggcttcgtgaaaccatatta
ccaatgaatccgctttctccaaattttggtgccccgccttacttgcctcgttttccagag
atgcctccttttttcaggccaagacataacccagcttccccacgtaattatccttctcca
gtgggacattctcatggacatgacaggtctgccattccttcccagccccctgattaccca
tcttcattttcacatggtacagatcgcagtggtccgtctaatggggaccgagttccctat
ccttgtgggagtgagagaccgggacattgttctacttttgacagaccatcttcttctcca
agaccctggaatcctcagacgattagcagtgggaatcataggggaacttctgatgttttc
ggcttggcttcaaaaaatgggcctcatagaagcagcggaagtcaagctcctattccaacc
agcacaaatattgagatcacaattcctgaaacatgtttgggccacgttcgtggagagaac
aacagtcacctgacccagatccagcagtcctcaggtgcaaaggtattgattcatgaccta
aaacctggggctacagaaggtgtagttatagtatctgggacaccaaaacaaacgcatgct
gctcagagccttattcaagctttcattttttgtggacagacacaaccatga
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