Carya illinoinensis (pecan): 122312937
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Entry
122312937 CDS
T08745
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122312937
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122312937
Surveillance factors
Other surveillance factors
122312937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
122312937
NCBI-ProteinID:
XP_042983547
LinkDB
All DBs
Position
6:complement(30131606..30140634)
Genome browser
AA seq
1588 aa
AA seq
DB search
MGEGKLDLPDDLISSKPSDHSCTSKGEASGGNGEEKGLMGFLDVSKDQVASESSIPLSPQ
WLYAKPTEPKMEMRAPTSASLGNSTDLNPKEGWRLDGSEDRKDWRKTATDSESSRRWREE
ERETSLLGGRRDRRKAERRAENVSIREAGESRALPTSDRWHDGRNSGHETRRDSKWSSRW
GPEDKDKDSRTEKRTDVEKEDAHNDHQPFVSSNRSASERDSDSRDKWRPRHRPEVHSGVS
NPNRAAPGFGIERGRTEGSNVGFTLGRGRSNVIGRGSSSGPIGAVYSDRSESVLGRLSNP
VGSFLYPRGKLLDIYRRQKLGQSFTNMPDEMEEVPPITQVGVVEPLAFVTPDADEEAILG
DIWRGKITNSGMVYSLYRKGRSTENFTGVEDLDLTEQNQGILLAALNEEVVDTSQEAAMD
DPYQTDGGAMLKYGLQRNMVDEDKLTGAIPQLDDGLAPKLSESNGVHGATEIDGAQRGAS
PINIGERWQMTDSDINKHAQSDANKFSTSYGIRSKLPDNSSSLFALTSPEHNQSSSIDTI
DLERVTLPEELSLYYIDPQGVMQGPFVGADIVLWFEQGFFGTDLPVRMADAPEGTPFQEL
GKVLPYLKVNDGYAISTKPNPNLEHIGPSDASLPAPVSVLESNSSAGNDLCQPLSEFDSI
SAQHVQSRASEPEVTLQLQRSEVQSFPKFVTQEEEIVFPGRPGNTGYSIAKSSGSNHHSS
ENSFVHPSLPNELTETGVLNQNDNKLHPFGLLWSELEDHTKHAKSSVTSNMGRAAPFGAM
ADPALPTETWSDVYRKNTLPDPSMYQDAMAAHHLSRREQESNHFDLAEQLMAQQFQQQQL
QQRNLLSHAHINESVLEHVPSQNLIHHPQLANHSAPDLDHLLTLQLQQQRQIQLQQHHQL
QQQQQLHQQQKLLQEQQQSQARQVLKQLLRNQLHDQGLVQSHIDSFRANSVLDQVLLEQH
LHELQQQSHHPLRHIDPSLEQLIQAKFSHMPQQDHQRDLLELIHVQHGQMQSLDQQLLQQ
DQLQARQLMGLRQRTGIEGERHIGSIWPPDESDQFLRNHAGSHRPHSSGFGPLDVYQRQQ
RPSHEEQLSHLERNVSLQERLRQGFYDPGSMSFERSMSLPAGAPGMNLDVLAMARAHGLD
MQEPNPLMQSAAQAGTFSSSIHPHNPHHPLVPNQFHVSQLDANEGRWSENNEQLENDWRM
SRIEQMHINAERQKRESEAKMTSKDATLWMSDGFDDEKSKRLLMELLHQKSGLQSTEPLD
AGKEARAPSGLYAGSSSSDSAFSLRMDQEAGLANSFAVGSYGSHSFEPLQDEGGCSLVSS
ETMPFRSDSVPLIEGQSHLAGINDVGQAIYKNSNTIGKSSRSNEFSESEGRKYGPPSEGM
VKGPVFEIQEGAVEQAGLATLDHGQISFNALSRQSSIGGKVGFYNDKIGTNNSFVEEVSK
ERVPAPSKGSENILLRRPPVSHTSSSQEGLSELVSDPVTRGKIPSGVADGSDTMAAGKKD
MRFRRTSSCGDADVSEASFIDMLKSNARKAVPAEAQSTAVYSEATDGTQGGRSGKKKGKK
GRQIDPALLGFKVTSNRIMMGEIQRIED
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgggggaaggcaagctcgatctaccggacgatctcatctcatccaagccgtccgatcac
tcctgtacctccaaaggggaagcttctggagggaatggggaggaaaaggggcttatgggg
ttccttgatgtgtcaaaagatcaagtggcatcggaaagcagcatacctctgtctccccag
tggctttatgccaaaccaactgagcctaaaatggaaatgcgtgctccaacttctgcgtct
cttggaaactcaactgacctcaatccgaaagagggttggcgtttggatggatcagaggac
aggaaagattggagaaagactgccactgacagtgaaagtagccgtcgctggcgtgaagag
gaaagagaaactagcttactcggtggcagaagagatcgtaggaaggcagaacgccgtgct
gaaaatgtctcaatcagagaagcaggtgagagtagagcattgcctacctctgatcggtgg
catgatggtcgtaattctgggcatgaaacacgtcgtgatagcaaatggtcatctagatgg
ggccctgaagacaaagataaggattcccgaactgagaagaggacagatgtagaaaaggaa
gatgctcataatgaccatcagccttttgtaagtagcaaccgttcagcttccgagcgtgac
tcagattctcgtgataaatggaggccacgtcatagaccggaggttcattctggtgtttca
aatcccaaccgtgctgcacctggatttggaattgagagaggacggacagaaggttcaaac
gtgggatttacccttggacgaggaaggtcaaatgttattgggagaggttcgtcttctggt
cccattggtgcagtttattctgacagaagtgaaagtgtacttgggagactgagcaaccct
gttggttcttttttgtacccaagaggaaagcttcttgacatatatcggaggcaaaagctt
ggtcaatcttttactaacatgccagatgagatggaggaggtacctcctattacccaagta
ggcgttgttgaaccattggcttttgtcaccccagatgctgatgaggaggccatccttggt
gacatatggaggggaaagatcacaaacagtggaatggtgtacagtctgtatagaaagggg
agatcaactgagaattttacaggtgttgaagacttggacttgactgagcaaaatcagggc
atcctactcgctgctctcaatgaagaggttgttgatacttcacaagaagctgcaatggat
gatccatatcaaactgatggtggtgcgatgttgaaatatggcttgcagagaaatatggta
gatgaagataaacttactggagcaattcctcagttggatgatggattggccccaaaactt
tctgaaagtaatggtgtccatggtgccacagagattgatggtgctcagcgtggtgcttct
ccaatcaatattggtgaaagatggcagatgacagattctgacattaacaagcatgctcag
tctgatgccaataagttttccacttcatatggcatcagatccaagcttcccgataattca
agttctctctttgctttgacttctcctgagcataatcaaagtagcagcattgacacaatt
gacttagaaagggtaactctgcctgaggagttaagtttgtactacattgatcctcagggg
gtgatgcagggaccatttgttggggctgacattgttttatggtttgaacaaggatttttt
gggacagatttgccagttcgcatggcagacgctcccgagggaacaccttttcaagaattg
ggcaaagtattaccttatctgaaagtcaatgatggatatgccattagcacgaaacctaac
ccaaacttagaacatattggaccgtcagatgctagtttaccagctcctgtttctgttttg
gaaagtaattcatctgctggaaatgacctgtgccagccattgtccgagtttgatagcatt
tcagctcagcatgttcagtcaagagcatctgagcctgaggttacactgcaactgcagcgt
tctgaggttcaaagttttcctaagtttgttacgcaagaagaagaaattgtatttccggga
agacctggaaacaccggatattctattgcgaaatctagtgggagcaatcatcattcttca
gaaaattcattcgttcatccttctcttccaaacgagttgacagaaactggtgtactaaat
caaaatgataataagttgcacccgtttggcttgctctggtctgagcttgaagatcataca
aaacatgcaaagtcatctgttacatcgaacatgggaagggctgctccatttggtgctatg
gccgatccagctcttcctacagagacttggtctgatgtttatagaaaaaatacacttcct
gaccctagcatgtatcaagatgccatggctgctcatcatttgtcacgcagggagcaggaa
tccaatcattttgacttagcagagcagcttatggcacagcaatttcagcagcagcaactc
caacagagaaatctgctgtctcatgcgcacataaatgaatcggttttagaacatgtgcct
agtcagaatcttatacaccacccgcaattggccaatcattctgcaccagatctggatcat
cttttgacacttcagttgcaacagcagcgacagattcagctccaacaacatcatcaattg
cagcaacaacagcagcttcatcaacagcaaaagcttttgcaggagcaacagcaatctcaa
gcccggcaggtgcttaaacagttgttacgcaatcaattacatgatcaagggcttgtgcag
tcgcatattgattctttcagagccaacagtgttcttgatcaggttttattggaacaacac
ctacacgaactgcaacaacagtctcaccatcctttgaggcatattgatccgtctttagag
caacttatacaagcgaaattcagtcacatgccacaacaagatcatcagagagatttactt
gagcttatacatgtacagcatggacagatgcagtcactggaccagcagcttcttcaacaa
gaccagctgcaggccaggcagttaatgggattgaggcagaggaccggtatcgaaggagag
aggcatattggttccatatggccaccagatgaatctgatcagtttctcaggaatcatgct
ggttctcacagacctcattcttcagggtttggcccattggatgtctatcagcggcaacag
aggccatcccatgaggagcagctgagtcaccttgagcggaatgtttcattgcaggagcgc
cttcggcaagggttttatgaccctggatccatgtcatttgagcgttcaatgtctttgcct
gccggtgctccagggatgaatctggatgttctagctatggcccgtgctcatggtttagat
atgcaagagccaaatccacttatgcaatctgctgctcaagcgggtacattttcatctagt
atccacccgcataatccccaccatcctttggttccgaatcaatttcatgtttcacaattg
gatgcaaatgagggccgctggtctgagaacaatgagcagctagagaatgactggaggatg
tctcggattgaacaaatgcatattaatgctgagcgtcagaaaagggagtcagaagctaaa
atgacttctaaagatgcaactttatggatgtcagatggattcgatgatgagaagtcaaaa
agattgttaatggaattgctccatcagaaatcaggccttcaatctactgagccattagat
gcaggcaaggaagcaagggcgccatctggcctctatgctgggtcaagctcctctgatagt
gcattcagtcttcgtatggaccaagaagctggtctggctaactcatttgcagtaggatct
tatggttctcattcatttgaaccactgcaggatgaggggggctgcagcttggtcagcagt
gaaacaatgccttttaggtccgattctgttcccttgattgagggacagtcacacttggca
ggcatcaatgatgttggtcaggcaatttacaaaaactctaacacaatcggcaagtcatct
aggagcaatgagttttcagagtctgaggggaggaagtatgggcccccgagtgagggtatg
gtgaagggtccagtttttgagattcaagaaggtgcggtggagcaagctggtttggctact
ctggatcatgggcagatttcatttaatgcccttagcaggcaatcatcaattggtgggaaa
gtgggcttctacaatgacaagattggaactaacaactcatttgtggaggaagtttccaag
gagcgggtgcctgctccatccaaagggtcagagaacattttgctgagacgtcctcctgtc
tcccacacttcctcctcacaggaaggattgtctgagctggtctcagacccagttacgagg
gggaaaattccaagtggtgttgccgacggttcggacaccatggcagctggaaagaaagac
atgcgattccggcgtacttcatcttgcggtgatgctgatgtttcagaggcatcatttata
gacatgctgaagagtaatgcgaggaaggcagtgccagcagaggctcagtcaacggcagta
tattcggaggcaacagatggaacgcaagggggacgaagtggcaaaaagaagggcaaaaaa
ggaaggcaaattgatcctgctctccttggtttcaaagtcaccagcaatcgcatcatgatg
ggtgaaattcaacgcatagaggattag
DBGET
integrated database retrieval system
