Carya illinoinensis (pecan): 122312984
Help
Entry
122312984 CDS
T08745
Name
(RefSeq) two-component response regulator ARR11-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
122312984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122312984
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
122312984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
P68HR
Motif
Other DBs
NCBI-GeneID:
122312984
NCBI-ProteinID:
XP_042983610
LinkDB
All DBs
Position
6:complement(22191143..22195832)
Genome browser
AA seq
580 aa
AA seq
DB search
MENGFSSPRSESFPAGLRVLVVDDDPTWLKILEKMLKKCSYEVTICGLAREALKLLRERK
DGYDIVISDVNMPDMDGFKLLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPI
RMKELRNIWQHVFRKKIHEIRDIEHHESFEGIRLSINGSEFSDDCIMFSGEDLTSFKKRK
DFQNKYDERDYGDHSSTKKHRVVWSVDLHQKFVKAVNQIGFDKVGPKKILDLMNVPWLTR
ENVASHLQKYRLYLIRLQKENDLKASFGGIKHSDVPSKDTSGGFGLQSSIHTNQNDVAND
RDQFSGSNFYGQDLDAKNHDGDREEIVLEPKPDSKKPLTADVPDPQDTRCSQMSFDHSSA
SLGSDVNYTEFDCSIPKQYPWSECPEVQSKQEHKLLLQLEDGFSQQLPCVPQHYIEIDQL
QSGRDISSPIKNEPVLVRCKSHRESHISPKETAIDDFSVQPKSLTAYHQSFEPSSTAISS
MKPQAVDLSCITDLESCQRNLISPTDSTFPPFNEDLTVCWLQGDFLNKNFGLPNMEFADY
SDHGFVADIPVHLYDTLTSDYECPYDPTEYPIVDQGLFIL
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggagaacggcttctcttctcctcggagcgagtctttcccggcaggtctccgggtgctc
gtcgttgatgacgaccccacgtggctcaaaattctcgagaagatgctcaagaagtgctcc
tatgaagtgactatatgtggtctggcaagagaagctttgaaattgcttcgggaaaggaaa
gatgggtatgacatcgtaatcagcgatgttaacatgcctgacatggatggtttcaaactt
cttgagcatgttggactagagatggatcttcctgtcatcatgatgtccgttgatggagaa
acaagcagggtaatgaaaggagttcagcatggagcctgtgattatctcctcaagccgata
aggatgaaagaactccggaatatatggcagcatgtcttcagaaagaagatacatgagata
agggacattgagcatcatgaaagttttgagggtattagactatcaataaatggatcagaa
ttttctgatgattgtatcatgtttagtggagaagatctgacatcttttaagaaaagaaaa
gattttcagaacaaatatgatgagagagactatggcgatcattcttctacaaagaaacat
agagtggtgtggtctgttgatcttcatcagaagtttgtcaaggctgtaaatcagattggt
tttgataaagtaggtcccaaaaagatactcgatttgatgaatgtgccatggctgactaga
gaaaatgttgctagtcacttgcagaagtaccgcctctacttgattagattgcagaaggaa
aatgatctgaaagcttcttttggtggtataaagcattcagatgttccttcaaaggatact
tctggaggttttggcctgcagagttcaatccacacgaaccaaaatgatgttgccaatgac
agggaccaattttctggcagtaacttctatggtcaggacctggatgccaaaaaccatgat
ggtgatcgagaggaaattgttttagagcccaagccagattcgaagaaaccattgactgct
gatgttcctgatcctcaggatacaaggtgctcacagatgagctttgatcattcttctgca
tcactgggatctgatgtaaactatacagagtttgattgtagcatcccaaaacagtaccct
tggagtgaatgtccggaagttcaatccaaacaggaacataagcttcttcttcagttagag
gatggctttagccagcaactaccatgtgttccacagcattacattgaaattgatcaacta
caatcaggaagagatataagtagccctatcaaaaatgaacctgtgcttgtccggtgcaag
agccatcgtgagagccatatcagtccaaaggaaactgcaattgacgatttttctgttcaa
cccaagagccttaccgcatatcatcaatcttttgagcccagttcaactgcaatatcgagc
atgaaaccacaggctgtcgatctgagctgcattacagacttagaatcttgccaacgaaac
ctgatatctccaactgactcgacttttccaccattcaatgaggacctgacggtttgctgg
ctacaaggtgatttcctaaataagaattttggactcccaaatatggagtttgctgactac
agcgaccacggctttgtcgccgacattcctgtccacttgtatgacacgctaacttctgac
tacgagtgtccttatgacccaacagaatatcctatagttgatcaaggtctatttatatta
taa
DBGET
integrated database retrieval system
