Carya illinoinensis (pecan): 122313014
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Entry
122313014 CDS
T08745
Name
(RefSeq) autophagy-related protein 2-like isoform X1
KO
K17906
autophagy-related protein 2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122313014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122313014
03029 Mitochondrial biogenesis [BR:
cill03029
]
122313014
Membrane trafficking [BR:
cill04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122313014
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122313014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Hisat_C
SH3_KIN17_C
Motif
Other DBs
NCBI-GeneID:
122313014
NCBI-ProteinID:
XP_042983638
LinkDB
All DBs
Position
6:33925313..33938584
Genome browser
AA seq
2000 aa
AA seq
DB search
MFSWNFAKSAEAMFSRWAVKRVCKFVLKKKLGHFILGDIDLDQLDVQLREGTIQLSDLAL
NVDCLNEKLGAATSVIIREGSIGSLLVKMPWKGEDCLVEIDELELVLAPCLKNDSPAGSE
TLSSVQDGNNGLHSDSEKLAHDSVDDTAKSISGDVHEGVKTIAKLVKRLLTSFHIRIKKL
IVAFDPYLEDEKNLGIHTTLVLRILETECGTCVSEDANSNGGTIVENFLGISQLTNFVKF
QEAVLELLRIDGDNNKESSPLVSGTSFGDYFSGGSHTTTPVVTGKKGGFSGNVKLSIPWK
NGSLDICKVDADVHIDPVELRLQPSTIKWLLLSWGTLKKLDKDCEGQMHYNPTNSFNINA
ASYGESPTPVSIGHVTDKAMPSCGASSMDTSTLPLQDSVSENFLPGSHVISDWVPFFIPK
NHEKTLEGGIEEEIDFGASVDQFFECFDGMRSSRSTLAGSGMWNWTSSVLSAITAASSLA
SGSLHIPSEQQHVKTTVKAALVEISFVLSFHDEDQRHLCDPPGDQANVHHLSSEWRDIVL
QLQVCPQEMKFEGMVDCIVVAHYYSSVNTATNFGWKRCTDNNASQKHLIHQLQAEVQGAL
PPFAYPAEDSYSNEVNSSVAADFPFGSKGGIVKVTLLKTSGVTHCQFSACSSSSDGSFTG
PTLFSLNLAPFIFWVNFPLINTLMNLSGELIKSVEMNSKKNEFPPRVFNENQGSSPAGIR
RGSTLCMTRLSSTERLCVNILMPNARVILCFHFENGEDSRGYSSCDQFLVLDFSSQSALN
KGIDKDGNSNSDASLQKKHSLMATRSLHLHVGDLKIYLVSPASEAEVGINSCNVKNQKFS
SKNILSMANKKGGLAVISMLWQEGHATGPWIARRAKFLATLEESRNRHVGKGFEFASVST
VKDLEGLKSQTRQEMILSSGLYLHVRLCPVTINLGSSQYKVLHGFLNEVISGFSCVESDA
ANSRKGSSVSQTSLFVECDTVEILLSPDVKEIRVGSMQRELPGSWCCLKLKIQKFELLSV
SNVGGIKDANFFWLAHGEGKLWGSINGIPDREFLLISCSDSTMKRGDGGGSNALSFRRAG
SDIVYLWEPDSFHGFTSINVRCGTIVATGARLDWVDAISSFFSLPSSETEQAGNNSMQKG
DLNASCGSTFVLNLVDVGLSYEPYLKNLVHGIEVPDPKCYSSSAKEKECFGEQVACLLAA
SSFNVSNSIVANSIGNECKIRVQDLGLLLCTVSEPSNFDGTYSVEHLHRVGYVRVAREAL
IEVILRNNCKNGLLWEVECSKSHIYVETCHDTTSGLIHLASQLQQLFAPDLEESVVHLQA
RWDNIQKARERNNYNSETRTCSGESGPSTSEVHTASVDATSESGLVGLMDEICEDAFQFD
NYHTYQFDSSESHICVSLDESLLRDASSLNVETPERLSHDLSFNRSVPVVGLESSQTSFL
EEDYFPEFIDGYCLSELRPLSELSIGRQSMPELPKCRSMNAEHEGLGKGNSGWYGDTYLS
IVENHIAESSEQSGVKQFVEAKLPFIDSRKHDDIGKVTGRVLLKNIDVRWRMYAGSDWHD
SRDDGEHYAKYHGRDKTACLELSLSGMEFQYDIFPIGGVHVSKLSLSIQDFHLYDRSRDK
PWKLVLGYNYSKDHPRESSSKALKLDLEAVRPDPLIPLEEYRLRIAFLPILLHLHQSQLD
FLVNFFGAMNSSVDQSPDCHEEPDGSKLFHGHTIANEAFLPYFQKFDIWPVLVRVDYSPH
HVDLAALRSGKYVELVNLVPWKGVELQLKHVHAVGIYGWGSVCDTIIGEWLEDISQNQVH
KILQGLPTIRSLVAVGSGAVKLVSLPVENYKRDRRVLKGIQRGTAAFLKSISLEAFGLGV
HLAAGAHDLLHQAEYILTSIPPSVPWAGESKMKTNVRSDQPKDAQQGLQRAIENVSDGLG
KSASALIRTPLKKYQSGAGAVSALASAIQAVPAAAIAPASACASAVHCTLLGFRNSLDPE
RKKESMEKYLGPIQSSEQDQ
NT seq
6003 nt
NT seq
+upstream
nt +downstream
nt
atgttttcgtggaattttgcgaagtcggccgaggcaatgttctcgcgctgggccgtgaag
agggtttgcaagttcgtgttgaagaagaaattggggcatttcatattaggggatatcgac
ctagatcagcttgacgtgcaactccgcgagggtacgattcagcttagcgatctcgcgctt
aatgtcgattgtctcaatgagaagttgggtgctgcaacatcagttatcataagagaagga
tccattggctctttacttgttaaaatgccttggaagggtgaagattgtctggttgagata
gatgaacttgaacttgtgcttgctccttgtttgaagaatgattcaccagctggaagtgaa
actttgagttcagttcaggatggtaacaatggcctccattctgactcagaaaagcttgca
catgactcggtggatgacactgccaaatctatatctggggatgttcatgaaggtgttaag
acaattgcaaagctggtcaaacggttgcttacaagtttccatatcaggataaagaagtta
atagttgcatttgatccatatttggaggatgaaaagaatttgggcattcacacaacccta
gtgcttcgaatattagaaacagaatgtggaacttgtgtttctgaagatgccaattctaat
ggtggtacaatagttgagaactttcttggaataagtcaattgacaaactttgtgaaattt
caagaagcggtacttgagcttcttcgaattgacggtgacaataataaagaaagctctccg
ttggtatctggaacgagctttggtgactatttctcagggggcagtcatactaccactcct
gttgtgacagggaaaaagggtggattttctgggaatgtaaaattaagtattccttggaag
aatgggtccttagacatttgcaaagtggatgctgatgttcatattgatcctgtggaattg
agacttcagcccagtacaataaaatggctcttgctttcatggggaactttaaagaaactg
gacaaagattgtgagggtcaaatgcattataatccaacgaattcttttaacatcaatgca
gcatcctacggcgaatcaccaacaccagtttctattggacatgttactgacaaggcaatg
ccaagttgtggtgcctcttcaatggacacctctactttgcccctgcaggattcagtctct
gagaattttctacctgggtcacatgtcatatcagattgggtgccatttttcatccctaaa
aatcatgaaaaaactcttgaaggtggaattgaagaagaaattgattttggggcaagtgtg
gatcaattctttgaatgttttgatgggatgagaagttcccgttcgactttggctggcagt
gggatgtggaactggacatcttctgttctcagtgcaatcactgctgcatccagccttgct
tctggatctttgcatattccctctgaacagcagcacgttaaaaccactgtgaaagcagct
cttgtggaaatttctttcgtgctttcatttcatgatgaagaccaaaggcatttgtgtgat
cctcctggtgatcaggctaatgttcatcatttaagttcagaatggagagacattgttctt
caattgcaggtatgccctcaagaaatgaagtttgaaggaatggtggattgtattgtggtt
gctcattactacagcagtgtaaatactgccacaaactttggttggaagaggtgtaccgat
aataatgccagtcaaaagcatttgattcatcaactgcaagctgaagttcaaggtgctctt
cctccgtttgcctatcctgctgaagattcttattcaaatgaagtaaacagttcagttgct
gcagattttccttttggaagtaagggtggcatagtcaaagtgacattgcttaaaacttca
ggggtcactcattgccaattttctgcatgttccagttcatcagatggcagttttacaggg
ccaacgttattttcattgaacttagcaccttttattttctgggtgaacttccctctaata
aatacactgatgaatctatctggggaattgataaaatctgttgagatgaacagcaaaaag
aatgagtttccaccccgggtcttcaatgagaatcaaggatcatctccggctggtatcaga
agaggttctactctttgcatgactagattgtcttcaacagaaaggttgtgtgtcaatata
cttatgcccaacgctcgtgtaattctgtgtttccattttgagaacggcgaagatagtaga
ggctactcttcctgtgatcagtttcttgttcttgatttttcatcacagtcagcattgaac
aagggaatagataaagacggcaattcaaattcagatgcaagtttacagaaaaaacattct
ttgatggctacaaggtctttgcatttgcatgttggtgatcttaaaatttacttggtttct
cctgcaagtgaggctgaggttggaataaactcctgtaatgtaaagaatcagaaattttct
tctaagaacattctctctatggcaaacaaaaaaggtggtcttgctgtcattagtatgctt
tggcaggagggtcatgcgactggtccttggatagcaaggagggcaaagttcttagccact
ttagaagaatcaaggaatagacatgtggggaagggtttcgagtttgcttctgtgtctact
gttaaagatcttgaagggttaaagtctcaaactcgacaagagatgattctgagctctgga
ttatacctgcatgttcgtctatgtcccgttacaattaatcttggtagttctcaatacaaa
gtcttacatggttttttaaatgaggtgataagtggattctcttgcgtggaatctgatgct
gccaattctaggaaaggatcttctgtgtctcaaacatcactttttgttgagtgtgatacg
gtagaaattttactgagcccagatgtgaaagagattagagtgggctcaatgcagcgtgaa
cttcctggatcatggtgttgtctgaaacttaaaattcagaagtttgaattgctgtctgtc
tcaaatgttggaggtattaaggatgccaactttttctggctagcccatggagaaggcaaa
ttgtggggttccatcaatgggattcctgatcgagagtttcttctaatatcgtgtagtgat
tctaccatgaaacgtggtgatggaggaggttccaatgcattgtcatttagaagggctggt
tctgatattgtatacctgtgggagcccgatagttttcacggttttacatctataaatgtg
agatgtggtacaattgttgcaacaggtgctcgcttggattgggtagatgcaatatcctcc
tttttcagtttgccttcttctgagactgaacaagcaggtaacaatagtatgcagaagggg
gatttgaatgcatcatgtggatctacttttgtccttaacttggttgatgttggattgagt
tatgagccctacttaaagaatttggtgcacgggattgaagttccggatcctaagtgttat
tcttcaagtgccaaagaaaaagaatgtttcggtgagcaagttgcttgtctgttagctgca
tcttccttcaatgtatcaaattcaattgtggcaaattcaattggtaatgagtgcaaaatc
agagtgcaagatcttgggcttcttctttgtacagtgtcagagcccagtaattttgatggc
acttacagtgttgaacatcttcacagggttggctatgttagagttgctcgggaggcactc
attgaagttatcttgagaaataattgtaagaatggtctcctctgggaggtggaatgttct
aagtctcacatttacgtggaaacttgccatgacaccacttctggtctgatccatttggct
tctcaacttcagcagctgtttgctcctgatttggaggaatcggttgtgcatttgcaggct
aggtgggacaatatccagaaggcacgagagaggaacaattacaatagtgaaactagaacc
tgcagtggtgaatctgggccatcaacttctgaagttcatactgcaagtgtagatgcaaca
agtgaatctgggttggttggcttgatggatgagatatgtgaggatgcatttcagtttgat
aactatcatacctaccaatttgattcttctgaatcccacatttgtgtttcacttgatgaa
agtcttcttagagatgcaagtagcttaaatgttgaaactcctgaaagattatcccatgat
ttgtccttcaatcggtctgtgcctgtagtgggactggaaagcagtcaaacctcattttta
gaagaagactactttccagagtttatagatggctattgtttatctgagttgcgtcctctg
tctgaattatccataggcagacaatctatgcctgagttacctaaatgcagatccatgaat
gcagagcatgaaggtcttggaaaaggaaatagtggatggtatggggacacctatttaagc
attgtagaaaaccacattgcagagtcaagtgagcaaagtggtgtgaaacaatttgtggaa
gcaaaactcccttttattgacagtagaaaacatgatgatatcggaaaggttacaggacgt
gtacttttgaagaacattgatgtcagatggagaatgtatgctggttctgactggcatgat
tctagagacgatggtgagcattatgctaagtatcatggaagggacaaaactgcgtgtctg
gagctttctttatcagggatggaatttcaatatgacattttcccaattggtggagtacat
gtgtctaaactttccctttcaattcaagattttcatctttatgataggagcagggataaa
ccatggaaactggtgctaggctataattattcaaaagatcatcctagagaatcttcatca
aaagcattaaaactggacttagaagctgtcagaccagatcctctaattcctctcgaggag
taccggttacgcattgctttccttcccattctattgcatcttcatcagtcccaacttgat
tttctcgtcaacttttttggggctatgaactcatcagttgaccaatctcctgattgtcat
gaagagccagatggttcaaaattgtttcatggccatacaattgccaatgaggcattcctt
ccttactttcagaaatttgatatatggcctgttcttgttcgggttgactatagtccccac
catgttgatcttgcggcactaagaagtgggaagtatgtagaacttgtaaatcttgttccc
tggaagggtgttgagcttcaactgaagcatgtccatgctgttggtatctatggctggggc
agtgtttgtgacacaattataggggagtggttggaagatatttcacaaaatcaggttcat
aaaatactgcaaggccttcctactatacgatcattagttgctgttggttctggtgctgtg
aagctggtttctttacctgttgagaactacaagagggataggagagtgctcaagggaatt
caaagaggcactgctgcatttcttaaaagcatttcacttgaagcatttggacttggagta
catttggccgctggggctcatgaccttttgcaccaagcagaatatatacttactagcatt
cctccttctgtaccatgggctggagaaagtaaaatgaagacaaatgtacgatctgatcag
cctaaagatgcccagcaaggacttcaaagggctattgaaaacgttagtgatggcttggga
aaatctgcttctgccttaatccggactcccttgaaaaagtatcagagtggagctggtgct
gtatctgctttggcatctgccattcaagctgttcctgctgctgccatagctccagcttct
gcatgtgcaagtgctgtccattgtacactccttggcttcagaaatagcctggatcccgag
cgtaagaaagagtccatggagaaatatttgggtcccattcagtcatcggaacaagatcaa
tga
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