Carya illinoinensis (pecan): 122313095
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Entry
122313095 CDS
T08745
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00900
Terpenoid backbone biosynthesis
cill01100
Metabolic pathways
cill01110
Biosynthesis of secondary metabolites
Module
cill_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
122313095
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
cill01006
]
122313095
Enzymes [BR:
cill01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
122313095
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
122313095
2.5.1.29 geranylgeranyl diphosphate synthase
122313095
Prenyltransferases [BR:
cill01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
122313095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
122313095
NCBI-ProteinID:
XP_042983761
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All DBs
Position
6:31529831..31532134
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AA seq
336 aa
AA seq
DB search
MVFSTIIPCASHLYLPRRMPTNLKSSPIRCYSSSSSSVSTQFDLKGYWTTLIGEINQKLD
EAIQVQYPEKIYEAMRYSVLAKGAKRAPPIMCVAACELFGGNRLAAFPTACALEMVHAAS
LIHDDLPCMDDDPSRRGQPSNHTIYGVDMAILAGDALFPLGFRHIVSHTPSDLVPDAHLL
RVITEIARAVGSTGMAAGQFLDLEGGPNAVEFVQEKKFGEMGECSAVCGGLLAGAEDEEI
QRLRRYGRAVGVLYQVVDEVLKDKMKNNEEKEEAGKKGKSYVGLYGVEKAMEVAEELRTK
AKKELDGFEKYGESVVPLYSFVDYAIDRGFSVGDAS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggtattctcgacgataataccatgcgcatcccacctctacctgcctagaagaatgccc
acaaaccttaaatcgtccccaattcgctgctattcttcttcctcttcttcggtttctacc
cagttcgatctgaagggatactggacaaccttaattggggaaataaaccagaagctggac
gaggcgattcaggtgcagtacccggagaagatctacgaggccatgcggtactctgtgctg
gccaagggggccaagcgggccccacccatcatgtgcgtcgccgcctgcgagctcttcggt
ggtaaccgcctcgctgcatttcccacggcctgcgccctcgaaatggttcatgcagcttca
ttgatacacgatgaccttccttgtatggatgatgacccttcacgccgaggacagccctca
aaccacacaatctatggtgttgacatggctatccttgcaggggatgccctcttccccctt
ggctttcgtcacattgtctcccacacaccttctgaccttgtacctgatgcccatctcctt
cgagtgatcacagagattgcccgagcagtagggtcaactggcatggccgctgggcagttc
cttgaccttgagggcgggcctaatgctgttgagtttgtgcaagaaaagaagtttggggaa
atgggtgagtgctcagcagtatgtggagggctgctagctggtgctgaagatgaggaaata
cagagattgaggcggtatgggagggctgttggggtgttgtatcaggtagtagatgaagtt
ttgaaagataaaatgaagaacaacgaggaaaaggaagaggcagggaagaaggggaagagt
tatgtgggattatatggggttgagaaggcaatggaggtggcagaggagctaaggaccaag
gccaagaaggaattggatgggtttgagaagtatggtgaaagtgtggtacctctttatagc
tttgtggattatgctattgatagaggttttagtgttggtgatgcaagttag
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