Carya illinoinensis (pecan): 122313133
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Entry
122313133 CDS
T08745
Name
(RefSeq) autophagy-related protein 13a isoform X1
KO
K08331
autophagy-related protein 13
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122313133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122313133
03029 Mitochondrial biogenesis [BR:
cill03029
]
122313133
Membrane trafficking [BR:
cill04131
]
Autophagy
Autophagosome formation proteins
ULK complex
122313133
Atg1 complex
122313133
Mitochondrial biogenesis [BR:
cill03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
122313133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
122313133
NCBI-ProteinID:
XP_042983811
LinkDB
All DBs
Position
6:complement(7451762..7458097)
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AA seq
592 aa
AA seq
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MFLPRDMDFPSNPQPELGKLEQIVYQFLLKSLHIILDSRVSSLHPRDRSGDLSSASRVRK
SDKWFNLVLGDRPAALDNLSFWHRNLMDPMIIDVILVREGSNLVGVSAETVIERWVVQYE
YPRVVAAQTGENSTLYKKTYKRSIILLRALYTHMRLLPAYKIFRQLSTSSQTYNFDIIYK
VSSFSDPFSRADEEMMEEYSFTPVEAFPGRLCISVTYRSTLTEFKLEPSTSLPPRIITDY
VGSPDTDPLRSFPSSEKGVHGISFPLRPVRAPSSVPLQRPHSWTSGFHRATFSAQNQPIV
GSPPAYRPSALPYDYSSPPADMYSNRAQHYRMPIHQRAISYDDYQLSPPFSPSPSPSSPS
YISSGNPMHTLMRPETAPVSIPFPMTSRSSRFLSPNSFDPNRSSLPPLSLRSRKTEPSSQ
ESPCGTASFRKIEALRSGEMQNHYAGQKMIRDSRDDSGRFSGLLSSSGSPRIGFSRSSSR
LSFQDDLDDNDFSCPFDVDDVDTLDFEARKSQDAAVGVLVHTLRTAPPLRQDPSCYSSHS
MKIELEGGVTSASGLFMPRKTADALEELRSYGEMKDLLLSKSGALVFSKDET
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgccgagagatatggattttccaagtaatcctcagcccgaattgggaaaattg
gaacaaatcgtttaccaattcctattaaagagtttacacatcattctggactcgagggtt
tcttctcttcatccacgtgatcggagtggggacctgtcatcggcttctcgggtgagaaaa
agtgacaaatggttcaacttagttctaggtgaccgccctgcagctctggataacttgagt
ttctggcacagaaatctgatggatccaatgataattgatgtaatacttgttcgtgaaggg
tctaatttagtgggagtatctgctgagacggttattgagaggtgggtcgtccagtatgaa
tatccacgagttgtggctgctcaaactggtgaaaattctaccttgtacaagaaaacatac
aagaggtcaataatacttttacgggctctttatacacatatgaggcttctcccagcatat
aagatatttcgacagctgagtacatcaagccagacttataatttcgatatcatttacaag
gtgtcttcatttagtgatccattctcaagggcggatgaggaaatgatggaggaatacagt
ttcactcctgtagaggccttccctggccgcctttgcatatctgtgacttaccgttctaca
ctgactgagttcaaacttgagccttcaacctcattgccaccgaggattattacagattat
gttggtagccccgacaccgaccctctgaggtcttttccctcttcagagaagggtgttcac
ggtatttcatttccattgagaccagtacgagctccatcttcggtgccacttcaacgccca
cacagctggacaagtggcttccacagagcaactttttctgcacagaatcaacctattgtc
ggatctccacctgcatatcgcccatctgctttgccatatgattattcatctccacctgcg
gatatgtatagtaacagagctcaacactatagaatgccaatccatcagagggccatcagc
tatgatgattatcagctttcacccccattctctccatctccatccccatcttctccatca
tacatctccagtggaaatcctatgcacacacttatgcgcccagaaactgctcctgtaagt
ataccatttccaatgacgagcagaagttctagattcctttctcccaattcttttgatcca
aatagaagttcccttccacctttatctctaagaagcagaaagactgagccttcatcacaa
gagtctccatgtggaactgcatcttttaggaaaatagaggctttaaggtctggagaaatg
cagaatcattatgctggccagaagatgatcagagatagcagagatgattcggggcggttc
tcagggttactatcttccagtggctcaccccgtattggattttctagaagctcaagcaga
ttatctttccaggatgacttggatgataatgacttttcttgtccttttgatgttgatgat
gttgacacattggattttgaagccagaaaatcacaagatgctgctgttggcgttctcgtt
cacacgctgagaacagcacctcctcttcgccaagatccaagttgttactcatcccactca
atgaagattgaacttgagggtggagtcacttcagcttctggattatttatgcctcggaag
acagctgatgcccttgaagagctcaggagttacggagaaatgaaagacctacttctgtct
aagagtggagctctggtgtttagcaaagatgaaacttga
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