Carya illinoinensis (pecan): 122313136
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Entry
122313136 CDS
T08745
Name
(RefSeq) ADP-ribosylation factor GTPase-activating protein AGD3-like
KO
K12489
Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122313136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122313136
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122313136
Membrane trafficking [BR:
cill04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
122313136
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122313136
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122313136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAR_3
ArfGap
Ank_2
Ank
PH
BAR
Ank_3
Ank_5
Ank_4
PH_8
ANK_LRRK2
PH_11
BAR_2
PH_20
PH_13
GldM_1st
DUF6444
Motif
Other DBs
NCBI-GeneID:
122313136
NCBI-ProteinID:
XP_042983814
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Position
6:complement(30437687..30449548)
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AA seq
812 aa
AA seq
DB search
MHFAKLDDSPMFRKQIQSLEESAESLRERSLKFYKGCRKYTEGLGEEYDGDIAFVGALET
FGGGHDDPISLAFGGPVMTKFTIALREIGTYKELLRSQVEHMMNDRLLQFVNIDLHEVKE
ARKRFDKASIVYDQAREKFLSLRKGTKTEVAIGLEEELHNARSTFEQARFNLVTALSNVE
AKKRFEFLEAVSGTMDAHLRYFKQGYELLHQMEPYINQVLTYAQQSRERSNYEQAALSER
MQDYKRQVDRESRWSSYGMNRSPNGDGIQAIARSSHKMIEAVMQSAANGKIQTIRQGYLS
KRSSNLRGDWKRRFFVLDSRGMLYYYRKQCSKPSASSSQLSGQRHSSELGSGLLSRWLSS
HYHSGGVHDEKSVARHTVNLLTSTIKVDADQSDLRFCFRIISPTKNYTLQAESALDQKDW
IEKITGVIASLLSSQAPEMCPSANLMGISHYRSASESSSFESSDFDPCTVEEYTSERSHA
TAHHERPIRNMQPQRSCIKSEKLTDVLRRVCGNDKCADCGAPEPDWASLNLGVLVCIQCS
GVHRNLGVHISKVRSLTLDVKVWDPSVISLFQSLGNTFVNSVWEELLQSRSGFQLDLVPV
GLYESDKSQLIFLCKPSHTDSISVKEKFIHAKYAEKLFVRKSKDRQYPHLVAQQIWEGVR
ANDKKAVYRHIVNSEADVNVAYKQTSCESSLAGDSMERSFTSSTNLAGTSEALSLENLDG
CTLLHLACETADIGMIELLLQYGANINATDCRGQTPLHHCICRGRTTYVKLLLTRGADPR
AVNCKGINPFELAVESNFGDSDVLALLAYSNG
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcgcaaagctcgatgactctcctatgtttcgcaagcagatacaaagcttggag
gaaagtgctgaatcattaagggagcgaagtttaaagttttacaaagggtgccgaaaatac
actgaaggacttggggaggaatatgatggggatattgcttttgtgggtgcactagaaact
tttggtggagggcatgatgatcctattagtttggcttttggaggccctgttatgaccaaa
tttactattgcgctgagagaaattgggacttacaaagaacttcttcgatcacaggttgag
cacatgatgaatgacagattactgcagtttgtcaatattgatctgcacgaggtcaaggaa
gcacggaagcgttttgacaaggctagtattgtttatgaccaggctcgtgaaaagtttctg
tccctgaggaaaggcacaaagacagaagtggcaattggtttagaggaggagcttcataat
gcaaggtctacatttgagcaagctcgtttcaatttggtaactgcactttctaatgtcgag
gcaaaaaagagatttgaatttttggaagcagtcagtgggacaatggatgcacatcttcgt
tacttcaaacagggatatgagttgttgcatcaaatggaaccgtacattaatcaggtcttg
acttatgcacaacagtcaagagaaaggtctaactatgagcaggctgcactttctgaaagg
atgcaagattataaaaggcaggtggatcgagagagtaggtggtcttcctatggtatgaac
agatctcctaatggagatggtatacaagccattgctagaagttcacacaaaatgatagag
gcagtcatgcagtctgctgcaaacggaaagattcaaaccattcgacaaggttatctctca
aagcgttcctcaaacttaaggggtgactggaaaagaaggttttttgttcttgatagccga
ggaatgttgtattactatcggaaacagtgcagcaaaccatctgcctctagcagtcaactt
tctggtcagaggcatagttcggagcttggttctggactgctgagtcgctggctttcatct
cattaccatagtggtggggtacacgatgagaaatctgttgctcgtcacacagtgaacctg
cttacatcaacaatcaaagttgatgctgaccaatcagatcttaggttttgcttcaggatc
atttcacctacaaagaactacactttgcaggcagagagtgccctggatcaaaaggattgg
attgaaaagatcacaggggtcattgcttcattacttagttctcaagctcctgagatgtgt
ccgtctgctaatctgatgggaattagtcattatcggtctgcaagtgagagtagttcgttt
gaaagttctgactttgatccctgcacagttgaagaatatacatcagagaggagccatgct
actgcacatcatgaacgcccaataagaaatatgcaaccacaacggtcctgcataaaaagt
gagaagctaactgatgtattgcgaagagtttgcggaaatgataaatgtgctgattgtggt
gcccctgaaccagattgggcatcattaaatcttggtgttcttgtttgtattcaatgttct
ggtgttcaccgtaatcttggggtgcacatatcgaaggtacgatctcttacacttgatgtc
aaggtgtgggatccttcggttataagtttgtttcagtctctgggcaatacatttgtgaac
tcggtctgggaggaactattgcaatcaagaagtggcttccagcttgatctcgtccctgtg
ggcttatacgagtccgataaatcacagttgatttttctctgtaaacctagtcacactgat
tctatatcagtgaaagaaaagttcatccatgcaaagtatgcagaaaagctttttgttcgc
aagtcaaaagacaggcaatatcctcatttagtcgcacaacaaatctgggagggtgtgcgt
gctaatgacaagaaagctgtataccgtcacattgttaattctgaagctgatgtgaatgtt
gcatacaagcaaacatcttgtgagtcctctttagcaggggattcaatggagaggtccttc
actagttctacgaatttggcaggtacaagtgaagccctgagcctggagaatctagatgga
tgcaccctgcttcacctagcttgtgaaactgcagacataggcatgatagaactcctccta
cagtatggtgcaaacataaatgcaactgattgcagaggccaaacgccactccaccactgc
atttgcagaggcaggaccacatatgtgaagttgcttcttacaagaggagctgatccccga
gctgtaaattgcaaaggtataaatccgtttgagctagcagtagagtcaaacttcggtgat
agtgatgtacttgctttattagcttactcaaatggataa
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