Carya illinoinensis (pecan): 122313138
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Entry
122313138 CDS
T08745
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122313138
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122313138
Membrane trafficking [BR:
cill04131
]
Endosome - Golgi transport
Others
AP-1 complex
122313138
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
INTS1_R4
HEAT_2
PDS5
V-ATPase_H_C
PAD_N
Motif
Other DBs
NCBI-GeneID:
122313138
NCBI-ProteinID:
XP_042983816
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All DBs
Position
6:complement(25363663..25388743)
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AA seq
879 aa
AA seq
DB search
MNPFSSETRLRDMIRAIRACKTAAEERAVVRKECAAIRASINENDPDYRHRNIAKLMFIH
MLGYPTHFGQMECLKLIASAEFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHANQY
IVGLALCALGNICSAEMARDLAPEVERLLQFRDPNTRKKAALCAIRIIKKVPDLAENFIN
PAAALLKEKHHGVLITGVQLCTDLCKVSPEALEHFRKRCTEGLVRTLKDVVNSPYAPEYD
IAGITDPFLHIRLVRLLRVLGQGDADASDLMNDILAQVATKTESNKNAGNAILYECVETI
MSIEDNGGLRVLAINILGRFLSNRDNNIRYVALNMLMKAITVDSQAVQRHRATILECVKD
SDASIRKRALELVYLLVNESNVKPLTKELIEYLEVSDQEFKGDLTAKICSIIAKFSPEKI
WYIDQMLKVLSEAGNFVKDEAWHALIVVISNASDLHGYSVRALYRAFQTSAEQETLVRVA
VWCIGEYGDMLINNVGLLDIENPITVTGSDAVDIVELAIKRHTSDLTTKSMSLIALLKLS
SRFPSCSERIRDIIIQNRGSLVLELQQRSIEFNSVIEKHQNIRSALVERMPVLDEATFIG
RRAGSSPAMVSTSNSASLNLPNGVAKPPAAPLVDLLDLSSDDVPAPSSSGGGFLQDLLGG
VDLSPGLNQTAISGTNEAPRTGTDILLDLLSIETPPAQRSSITDILSSSQGDKSPVASLG
EISSLPSLSTRATSAGATSMMDLLDGFAPNPPMPEGNGPVYPPIVAFESSSLRITFDFSK
APGNPRATAILATFTNLSQNIYTDFIFQAAVPKFLQLHLDPASSNTLPANGNGSITQNLR
VTNSQHGKKSLVMRMRIAYKFNNEDILEEGQINNFPRGL
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccttctcttccgaaacgcgcctgagggacatgattcgggctatacgtgcctgc
aaaactgcagcagaggaacgtgcagttgttagaaaagagtgtgctgctattcgtgcctca
attaatgaaaatgatccagattatcggcaccgtaacattgcaaagctcatgttcatacat
atgcttggctaccccacacattttggtcaaatggaatgcctgaagttgattgcatctgct
gagtttcctgagaagagaattgggtatcttggcctcatgttgcttcttgatgaaagacaa
gaagtccttatgttggtcacaaactcactaaaacaagatctcaatcatgcaaatcagtat
attgtaggacttgctctttgcgctttgggaaatatttgttcagcagagatggcccgtgat
cttgcaccagaagtagaaagattgttgcaatttcgagatccgaatactcggaaaaaagca
gctttgtgtgctataaggattataaagaaagtaccagacctggcggaaaattttataaat
cctgctgctgccttacttaaagaaaaacatcatggagttttaataacaggagttcaactt
tgtacagatctatgtaaagttagtccagaagcccttgaacatttcagaaagagatgcaca
gagggtttggtcagaactctaaaggatgttgtgaacagcccatatgcacctgagtatgat
attgctggcatcacggaccctttccttcatatcagattggttagacttttgcgtgtgttg
ggccaaggagatgcggatgccagtgatttgatgaacgacatacttgcacaggtggcaaca
aaaactgaatccaataaaaatgctggcaatgctattctgtatgaatgtgttgaaactatc
atgagcattgaagataatggtggcttacgcgttcttgctatcaatatcttgggaagattc
ttgtcaaatcgtgataacaatatcagatatgttgcactaaacatgctgatgaaggcaata
acagtagatagtcaagcagtgcagcgacatcgggcaacaatcttggaatgtgtaaaggat
tcagatgcttcaattcggaaaagggcccttgaacttgtttatcttctagtaaacgaaagc
aatgtaaaacctttgacaaaagagctgattgaatatctggaagtaagtgatcaggaattc
aagggagatcttactgccaaaatttgttccataattgcgaagttttcacctgagaagata
tggtacattgatcagatgctcaaggttctctcagaggctggaaattttgtgaaagatgaa
gcctggcatgctcttattgttgtgataagcaatgcttctgatctccatggatattctgta
agggcattatacagagcattccaaacatcagctgaacaggaaacccttgttcgagtggca
gtttggtgtataggagaatatggtgacatgttgatcaataatgtcgggttgctcgatata
gagaatccaataactgtaacaggatctgatgctgtggacattgtagagcttgccattaag
cgccatacatcagatctcacaactaaatcaatgtctttgattgctctgttaaagctctct
tctcgatttccatcttgttcagagaggattcgagatataatcattcaaaacagaggaagt
cttgtgcttgaattgcagcagagatccattgaattcaattctgttattgagaagcatcag
aatattaggtctgcactggttgaaaggatgcctgttctagatgaggcaactttcattgga
aggagggccggttcatcgccagcaatggtttcaacttccaattcagcatcacttaatctc
cccaacggagttgctaaacctcctgcagcacctcttgtagatctacttgatctaagttca
gatgatgtccccgcacctagctcttctggtggtggttttcttcaggatcttcttggtggt
gttgatctttcaccaggattaaatcaaactgcaatttctggcacaaatgaggctccaaga
actggcacggatattctactggatctcttgtctattgaaacaccacccgcacaaagatca
tccataactgacatattatctagcagtcaaggtgacaaatcaccagttgcatcattggga
gaaatttcatccctgccttcactctctacacgagccactagtgctggggctacttctatg
atggatttgttggatggatttgcccccaatccaccaatgcctgaaggcaatggtccagtt
tatccacctattgttgcgtttgagagcagctccttgagaataacatttgacttctctaag
gcacctggaaacccccgggcaacagcaatactggctacttttacgaatttgtcacagaat
atctatacagattttattttccaggcagcagttccaaagtttcttcaactgcacttagat
ccagctagcagcaatactctccctgcaaatggtaatggatccataacacaaaacttgagg
gttactaacagccaacatggaaagaaatctcttgtgatgcgaatgaggatagcttataag
ttcaacaacgaagatattttggaggaagggcagatcaacaatttccctcgtggtttgtga
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