Carya illinoinensis (pecan): 122313178
Help
Entry
122313178 CDS
T08745
Name
(RefSeq) nuclear pore complex protein NUP54
KO
K14308
nuclear pore complex protein Nup54
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122313178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122313178
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122313178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Motif
Other DBs
NCBI-GeneID:
122313178
NCBI-ProteinID:
XP_042983886
LinkDB
All DBs
Position
6:complement(29559454..29562693)
Genome browser
AA seq
382 aa
AA seq
DB search
MFGAQASSSAFGTPSPSPTFGTPSTTLAFGTPSSTPTFGTPSSAPAFGTPTTPSFATGFG
SSLFATPFSSQPQQQQQQQQQLTPLFQQPASTGFGFQTTAFSTPQPSPFPNAQLTTQMAP
VTPLPFSLADRDIQAIVDAYKSEPGNPKYAFKHLLFSVTDPPFKVKPAGVSDIMWAEAMG
KLEGMESADRERLWPQLVQGFKDLSQRLKLQDEVIVSDAERLRITQSNVKMLQRHFQADT
LPRIERMRQKEQALQRRLLRVMRIVEALEGKGFRLPLTKGEAELAEKLAAITRQLKGSGA
ELSKRVQNLLTLSRVQANGIGAGSSIYLPGSTKIDEQSLADMQEVLQQQTEAIARLGNVL
KRDIRDMEIIMAEDTQRTEFMS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttcggagctcaagcttcctcctccgccttcggcaccccctctccaagcccaaccttc
ggcactccgtctacgacccttgcttttggtactccgtcttcgactccgacatttggaact
ccctcttcggcaccggcgttcggaactccaacgacgccgtctttcgccactggattcggt
tcctctctcttcgccaccccgttctcttctcagccccagcagcaacagcagcaacaacag
caactcactccgttgtttcagcaaccggcttctacgggtttcgggttccaaacgacagcg
ttctctacgccgcagccctctcctttccccaatgcgcaattgactactcagatggctccc
gtgacccctctccctttctctctcgccgatcgagatattcaagcaattgtcgatgcttat
aagagcgaacctggaaaccctaaatatgcttttaagcatttattgttcagcgtgacagat
ccgccgtttaaggtgaagcctgctggtgtatcagatattatgtgggcagaggctatgggg
aaactggagggtatggaaagtgctgacagggaacgcctgtggcctcagcttgttcagggt
tttaaggatctttcacagcgtcttaagctccaagatgaagtcattgtttcagacgctgag
agattgcgaattactcaaagcaatgtgaagatgcttcaaagacattttcaagctgatact
cttcctcggatcgaaagaatgagacagaaagagcaagctcttcaaaggcgtcttttacgg
gtaatgagaatagtggaggcattggagggtaagggtttcagattaccattaacaaaaggg
gaagctgaattggccgagaagttagctgcaataactagacagttgaaaggatctggagca
gaactttctaagagggtacaaaacctgctcactttgtctcgtgttcaagcaaatggcatt
ggggctggcagttccatttatcttccaggatcgaccaaaatagatgaacagagtcttgct
gatatgcaggaggtcttacaacagcagacggaggccattgctaggcttggcaatgttttg
aagagagatatcagagacatggagatcataatggccgaggacacacaacggacagaattt
atgagctaa
DBGET
integrated database retrieval system
