Carya illinoinensis (pecan): 122313209
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Entry
122313209 CDS
T08745
Name
(RefSeq) transcription elongation factor SPT4 homolog 2-like
KO
K15171
transcription elongation factor SPT4
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122313209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122313209
03019 Messenger RNA biogenesis [BR:
cill03019
]
122313209
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
122313209
RNA polymerase I system
122313209
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
122313209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
HIPIP
Motif
Other DBs
NCBI-GeneID:
122313209
NCBI-ProteinID:
XP_042983930
LinkDB
All DBs
Position
6:complement(28680858..28683986)
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AA seq
116 aa
AA seq
DB search
MGSAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDNERVVDCTTPNFT
GIISVMEPSRSWAARWLRIGKFVPGCYTLAVSEALPEDLQNLCEDEHVQYAPPKRV
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgggaagtgctgcggcgcagattccgacgagcttcgggcatgaactgagggcttgcctt
cgttgccgcctcgtcaaaacctacgatcagtttcgggaatcggggtgcgagaactgtcct
ttctttaagatggacgaggataacgaacgtgtcgtcgattgcaccactcctaattttact
gggataatctcggtcatggagccaagtagaagttgggctgctcggtggctgcgaattgga
aaatttgtccctggttgttacactcttgcagtctcagaggctcttccagaggacttgcag
aatttatgtgaagatgagcacgtgcaatatgcgccaccgaaacgtgtatga
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