Carya illinoinensis (pecan): 122313225
Help
Entry
122313225 CDS
T08745
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00061
Fatty acid biosynthesis
cill00071
Fatty acid degradation
cill01100
Metabolic pathways
cill01212
Fatty acid metabolism
cill04146
Peroxisome
Module
cill_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122313225
00071 Fatty acid degradation
122313225
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122313225
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cill01004
]
122313225
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cill04147
]
122313225
Enzymes [BR:
cill01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122313225
Lipid biosynthesis proteins [BR:
cill01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122313225
Exosome [BR:
cill04147
]
Exosomal proteins
Exosomal proteins of breast milk
122313225
Exosomal proteins of breast cancer cells
122313225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
Motif
Other DBs
NCBI-GeneID:
122313225
NCBI-ProteinID:
XP_042983958
LinkDB
All DBs
Position
6:complement(5823089..5835753)
Genome browser
AA seq
697 aa
AA seq
DB search
MNAYIVGVLVPLVVTVLLRNAKNSKKRGLLADVGGEPGYAIRNHRFTSPVQTAWEGISTL
AELFEHSCEQYRDKYLLGTRELISREVEVTEDGRSFEKLHLGDYEWLTYGRAFEAVCNFA
SGLAQLGHRKEERAAIFADTREEWFIALQGCFRRNVTVVTIYASLGEEALCHSLNETEVT
TVICGCKELKKLIEISEQLDTVKRVICMDDEIPSNASYVEQSKSWTITSFGDVESLGREN
PVDADLPLPADIAVIMYTSGSTGLPKGVMMTHANVLATVSAVMTIVPGLGSKDIYMAYLP
MAHILELAAENVMAAVGSAIGYGSPLTLTDTSSKIKKGTKGDATVLLPTLMTAVPAILDR
VRDGVLKKVNAKGGLAKKFFDVAYTRRLSAVNGSWFGAFGPEKAIWNFLVFKKVRAILGG
RIRFVLSGGAPLSGDTQRFINICLGAPIGQGYGLTETSAGATFSEVDDTSVGRVGAPLPC
SFIKLIDWPEGGYLTSDSPMPRGEIVVGGPNVTVGYFKNEEKTKELYKVDERGMRWYYTG
DIGQFHADGCLEIIDRKIDIVKLQHGEYVSLGKVEAALLVSPYVDNIMLHANPFHSYCVA
LLVASQHTVEDWASKQGIPFTDFADLCEKAETKKELLASIQKEAKRAQLQKFEIPIKIKV
LSEPWTPESGLVTAAFKIKREIIRKAFSEELSELYAS
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcctatattgttggtgtccttgttcccctcgttgttactgttctacttaggaat
gcgaagaattcaaagaaaagggggttgctcgctgatgttggtggggaacctgggtatgct
atccggaaccatcggttcacttccccagtgcaaacagcatgggaaggtatctcaactctt
gcagaacttttcgagcattcatgtgagcagtaccgagataagtacttacttggaactagg
gagttgatttcaagggaggttgaagtcactgaagatggaaggtccttcgagaagcttcat
ttgggagactacgagtggctaacctatggtagagcatttgaagctgtgtgcaactttgca
tctggtttggctcaacttggtcacaggaaggaagaacgtgcagcaatctttgctgacaca
agagaagaatggttcattgcattgcagggttgctttaggcgcaatgtcactgttgtgact
atctatgcatctttgggggaggaggctttatgtcattcattaaatgagacagaggttact
actgtgatatgtggatgcaaagaacttaaaaaactcatagagataagtgaacaacttgac
acagttaaacgtgtgatatgtatggatgatgagatcccctctaatgcctcatacgttgag
cagagcaaaagctggacaattacctcatttggtgatgtggaaagtcttggcagagaaaat
cctgttgatgccgacttaccacttccagctgatattgcagttataatgtacacaagtggg
agtactggattgcctaagggtgtaatgatgacacatgccaatgtcctagctacagtttct
gctgtcatgacaattgttcctggccttggaagcaaggatatttacatggcatacctaccc
atggctcatatccttgaattagctgctgagaatgtgatggctgctgttggaagtgctata
ggatatggatcacctttgacgcttacggatacatcaagcaagataaaaaaaggaacaaag
ggggatgccactgtgctgttgccaactttaatgacagctgtcccagcaattcttgaccgt
gtccgtgatggggtactcaagaaggtaaatgcaaagggtggattagcaaagaagtttttt
gacgtggcatatactcgtaggttgtctgcggttaatggaagttggtttggggcttttggc
ccggaaaaggccatttggaattttcttgtgtttaaaaaggtcagagcaattctgggaggt
cgcatccgctttgtgctgtctggaggtgctcctctctccggtgatactcagagattcatc
aacatttgtcttggtgctccaataggtcaaggttatggtcttactgagacttctgctggt
gcaacattttctgaggtcgatgatacatctgttggtcgtgttggagctccacttccttgc
tcattcattaagttaattgattggcctgaaggtggatatctaaccagtgattcaccaatg
cctcgtggggagatagtggttggtggtccaaatgttacagttggatatttcaaaaatgaa
gaaaaaacaaaagaattatacaaggtcgatgagagaggaatgagatggtactatacaggt
gacatagggcagtttcatgctgatggttgccttgagataattgatcgcaaaatagacata
gtcaaacttcagcatggggagtatgtctccctaggcaaggttgaagccgctcttcttgtt
agcccctatgtcgacaatatcatgttgcatgctaatccctttcatagttactgtgtggct
ctgctggtagcttctcagcatacggtggaagattgggcttccaagcaaggaattcctttt
actgactttgcagacttgtgtgagaaagccgaaacgaagaaggaacttcttgcatcaatc
caaaaggaagcaaagcgggcacagttgcagaagtttgagattcccataaaaatcaaagtg
ctttctgaaccgtggactcctgaatctggtctagtcacggcagctttcaagatcaagaga
gagattattagaaaggctttctctgaagaactctctgaattatatgcctcatga
DBGET
integrated database retrieval system
