Carya illinoinensis (pecan): 122313239
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Entry
122313239 CDS
T08745
Name
(RefSeq) DNA repair protein XRCC2 homolog isoform X1
KO
K10879
DNA-repair protein XRCC2
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
122313239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122313239
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecA family proteins
122313239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad51
Motif
Other DBs
NCBI-GeneID:
122313239
NCBI-ProteinID:
XP_042983996
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All DBs
Position
6:19762975..19787099
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AA seq
343 aa
AA seq
DB search
MEKVVASPREWIDRNESAKAMLARVLTARPLLLLPPLHRVPLRVGNVVELVGTSSSAKTQ
ILIQAAVSCVLPKEWNGVYYGGLDRLVMFIDLDCRFDILRLSKMLKHRINGQSNGSIKKI
DQEHMDFDLWNNDTKKNPTYDEELYSLCMRRFLFIRCYDSFQFLATLKTLHYRIQKEQEL
HGISVHILMIDGIGAFHWIDRASTFMPLGATNRKTPSLQTVSETVVQEIRKLLLLHPMLV
IATKATIFGDRYSMTETKRNLGKLDASNSRSISSTSLQLPYREYMPSVWQTFVTHRVLVG
ASDDPLIRTNDSDRSLYFSEWLLPPQSFVDKFIVKEAGVFMVP
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagtggtggccagccccagagaatggatcgatcggaacgagagcgccaaagcg
atgctcgctagggttttaacagcgcgccccttgttgcttcttcccccacttcatagggtt
cccctacgcgtcggtaatgtggttgagcttgtcggcacttcttcttctgccaaaacccaa
atcctgatacaggctgcagtgagttgtgttcttcctaaagagtggaatggggtgtactat
ggaggcctcgaccgcttggtaatgttcattgacttggactgtcggtttgatattttgcgc
ctttctaaaatgctgaagcatcgaataaatgggcaatctaatggatcaataaaaaaaata
gatcaggagcacatggattttgacttatggaacaatgataccaaaaagaatcctacttat
gacgaggaattatattctttgtgcatgagacggttcctgttcattcgctgttatgatagt
tttcagtttcttgccactctcaagacattgcactatcggattcagaaggaacaagaactg
catggcattagtgttcatatactcatgattgacggtattggagctttccattggatagat
cgtgcctcaacattcatgccattaggggctactaacaggaaaaccccctctcttcagact
gtgtcagaaactgtagttcaggagattagaaagcttctgctgctgcatcccatgcttgtc
atagctacaaaagctaccatttttggagatagatattccatgacggagaccaaacggaat
ttggggaaattggatgcctcaaattcaagaagcattagcagtacatctctgcaacttcct
taccgtgagtacatgccttctgtctggcagacctttgttacacacagggtacttgtagga
gcatcagatgatcctctcattcgaaccaatgacagtgatcgctcgctctatttttcagaa
tggctgctgccaccacagagttttgtggataaatttatagtcaaagaggctggtgtcttc
atggtcccatga
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