Carya illinoinensis (pecan): 122313242
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Entry
122313242 CDS
T08745
Name
(RefSeq) uncharacterized protein LOC122313242 isoform X1
KO
K17925
sorting nexin-13
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cill04990
]
122313242
Domain-containing proteins not elsewhere classified [BR:
cill04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
122313242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
DUF1678
Motif
Other DBs
NCBI-GeneID:
122313242
NCBI-ProteinID:
XP_042984002
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Position
6:33595262..33606156
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AA seq
1052 aa
AA seq
DB search
MVLRMKAMESIKDLIEEAKIRTVWWALCIFAVSYFLSHTSKSMWMNVPIAILFVSALRIL
FNEVDFHWKDRSVRLRTYLSHLEKKQLSVNDSRLSTVPPPPKWKRKIDSPVVEAAMNDFI
DKILKDFVVDLWYSEITPDSEFPQHIHAIVMDALGEISGRVKELNLVELLTRDIVDLIGN
HLDTFRRNQAAIGVEVMETLSSEERDERLKHHLIASKELHPALISPESEYKVLQRLIGGV
LAVVLRPREAQSPLIRSIARELVTCLVVQPIMNFACPAYINELIEYLLLTAKDDSLKGRS
SYHSTNEATHPHDHPLASGGVQDVDSTSRKHLSSNQGTDMTMAKIGNQRETSLDYSTEKP
TKYRSADWARMLAAATQRRTEVLAPENLENLWTKGRNYKKKEQKNIKVGSQAPIGKGSGI
NCAVSSKDLGKEMLANRHEMPMGTDEVGIKQLSHRLSVEDMLSDENEAEEAFSQAPNKEF
YFEGGNTLDVLEHTSSLVTDGNKHPLKRSNSTSALIPQPDTEKKSKGGHGGLIVSEFYGP
SFGQHSGEYSGKTALDVVLRSEEEQVPKLKCRVMGAYFEKLGSKSFAVYSIAVTDAENKT
WFVKRRYSNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLQDLLSIA
NVAEQHEVWDFLSVSSKNYSFGKSSSVMRTLAVNVDDAVDDIVRQFRGVSDGLVRKVVGP
SPSNEASSATIRNLPWNVDEINRHIASHYSVETTSSFSDNDEGHKDENDCREEVNSVNAS
GWHSDNEVNSKSFPPRVIKHSKEPMNSSSEKRHDLMVKSGIRGGGFPVRSLPLISDQLED
PVGMPPEWTPPNVSVPLLNLVDNIFQLKRRGWLRRQVFWISKQILQLIMEDAIDDWLLRQ
IHWLRSDEIIAQGIRWIQDILWPDGTFYLRVRNTPSNNDDAEPHQKPFQTTNQFGGSKVS
SLVSFEQQLQAARRASDVKKMLFDGAPTALVSLIGPKQYRRCARDIYYFTQSSICVKNLA
YEALELLLVSVFPELTTLVRDVHGKMSISRPT
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggttttgagaatgaaggcgatggagtccataaaggatctaatcgaggaggctaaaatt
cgaacggtttggtgggctctgtgtatcttcgccgtttcgtacttcttatcgcatacaagt
aaatcaatgtggatgaatgtacccatagcaattctgtttgtttctgcactgcgcattctt
tttaatgaggttgatttccattggaaggatcgatcagttcgcctacgaacatatttatct
catttggagaagaagcagttgtccgtgaatgattcaaggctttctactgtgcctccccct
ccaaaatggaaaaggaaaatcgattctcctgttgttgaggctgcaatgaatgattttatt
gataaaatattgaaggattttgtagtggatttgtggtattcagaaattacaccggacagc
gagttccctcagcatatacatgccatagtcatggacgctcttggtgaaatttcgggaaga
gttaaagagttaaatcttgttgagttgcttacaagggatatagttgatttaattgggaat
cacttggacactttcagaaggaaccaagctgctataggtgttgaagttatggaaacactg
tcttctgaggagagagatgagagattgaaacaccatcttatagcttctaaggagcttcat
ccagcattgatatctcctgagagtgagtacaaggttcttcaaaggctgataggaggagta
ttggctgtggtactaagaccacgagaagctcagtctcctttgattcgatccattgctcgg
gaactagtaacatgcctagttgtgcaaccaattatgaattttgcatgccctgcgtacatc
aatgagttgatcgaataccttttgcttactgctaaagatgacagccttaaagggaggagt
agttatcattcaaccaatgaggcaactcatcctcatgatcatcctcttgcatcagggggt
gtacaggatgtggattctacctcaaggaagcatttatcctctaatcaagggactgatatg
acaatggctaaaattggcaatcaaagagaaacatccttggattacagcactgaaaagcct
acgaaataccggtctgctgattgggcacggatgctggcggctgcaacccagagaagaact
gaagttcttgcccctgaaaatcttgagaacttgtggacgaaaggaagaaattataaaaag
aaagagcagaagaatattaaagtaggttctcaagctcctataggaaagggttctggaata
aattgtgctgtatccagtaaagacctgggaaaggaaatgttagccaacaggcatgaaatg
cctatgggaacagatgaggtgggtataaagcagctaagtcatcgattaagtgttgaggat
atgttaagtgacgagaatgaagctgaagaagctttctctcaagctcctaacaaggaattc
tatttcgagggagggaatactcttgatgtgttggagcatactagtagtcttgtaactgat
ggaaataaacatccgctcaagagatctaatagcacttctgctttgataccccaacctgat
acagagaagaaatcaaaaggaggacatggagggctcattgtttctgagttctacggcccc
agtttcggccagcacagtggagagtatagtggtaagactgctttggatgtggtgcttcgc
agtgaagaagaacaagttcccaagctcaagtgccgggtcatgggagcatattttgagaaa
cttgggtcaaaatcttttgcagtttattcaattgcagtgacagatgcagaaaataagact
tggtttgtcaaaagaagatacagtaattttgagcgattgcatcggcatcttaaagacatt
cctaattatacactacatttgcctccgaaaaggatattctcatcaagcacagaagatgct
tttgttcatcagcgctgcattcagcttgataaatatctgcaagatctcctgtcaatagct
aatgttgctgaacagcatgaagtgtgggattttttgagtgtgtcctctaagaattactct
tttgggaaatcttcctcagtgatgagaaccctggcagtcaatgtggatgatgcggtggat
gatattgttcgtcaattcagaggagtttcagatggattggtgcgtaaagttgttggtcca
tcaccctctaacgaagcttcttcagcaaccatcaggaacttgccctggaatgtggatgag
ataaatagacacattgcaagtcattattctgtagaaactacgagtagtttttctgataat
gatgaaggccacaaggatgagaatgattgccgtgaggaagttaatagtgtaaatgctagt
gggtggcattcggacaatgaagtgaattcgaagagttttccacctcgggtaatcaaacat
agcaaagagcctatgaactcaagttctgagaagagacatgatttaatggtgaaatctgga
atacgcggaggtggatttccagtaagaagtctccctttaatctcagatcagttggaggac
ccagttggaatgccccccgagtggactccacctaacgtcagtgttcctctgttgaatcta
gtcgataatatatttcagctcaagagaagaggctggctgaggagacaggttttttggata
tcaaaacaaatattacagttaataatggaagatgcaattgatgactggctcttgaggcag
attcattggttgcggagtgatgaaattattgctcaagggattcgatggattcaagatatt
ctctggcccgatggcacattctacctaagagtacggaacactccaagtaacaatgatgat
gccgaacctcatcaaaaaccttttcaaactacaaatcaatttggtggcagtaaggtctcc
tcattggtgtcttttgaacaacaacttcaggccgctcgccgagcaagtgatgtcaagaaa
atgttatttgatggagctccaactgccttagtcagcttgattgggccaaagcagtacagg
cgttgtgcgagggacatatattatttcactcagtcttctatctgtgtgaagaaccttgca
tatgaagcactagaattattacttgtatctgttttccccgagctgaccacccttgttcgt
gatgttcatgggaagatgagtatttcacgacctacatag
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