Carya illinoinensis (pecan): 122313299
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Entry
122313299 CDS
T08745
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122313299
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122313299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
RE_AspBHI_N
DUF3942
Motif
Other DBs
NCBI-GeneID:
122313299
NCBI-ProteinID:
XP_042984107
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Position
1:complement(21383588..21393107)
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AA seq
659 aa
AA seq
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MAASPDRTPDSTMSLSLLIMDAEEKPSQPDNNNEQPHPIKNEIAVAPNSSQDAATIVHQR
DAAGLTGSFASSGDRSVYPPNIYAPQAQPFYYRGYDNASGEWDEYPPYVNAEGMEIGSPG
VYNDNPSLLFHSGYGYNPQMPYGPYSPVTTPLPSVGGDAQLYSPQQFPFSGPPYYQQLVP
PSMPYLTSPTPVSQPELTVDQQGDGMLFGQRPGFPPVGSFSRGSFPGGLGFHDSLQGIEG
VRSGGIWSDWSKPSDRQRSFMPFSPAVSPQPVGTLGSFGQNVGMASQQQKPLYGFGSGLN
PYNRGYLPSGFNQGSSFGSASISSLGANGRSWFSLENNKRHLRESGSLCSCNGTPDILSE
QNRGPRASKPKSQTIADNNPSVENNKRSTSTAKIHDDSLNRPDFVTEYNDAKFFIIKSYS
EDNVHKSIKYGVWASTPNGNRKLDAAYREAQEKQDTCPIFLFFSVNASAQFCGVAEMFGP
VDFDKSVDYWQQDKWSGQFPVKWHIIKDVPNSQFRHIVLENNDNKPVTNSRDTQEVKLEQ
GIEMLNIFKNYETDMSILDDFDFYEERQKAMKERKARQQTGLMAVGVVGDSEHRNAVTLS
GDFIKQMSKSFAQVVCMDEGSKEVTTLGERASSASDGSMGARVKLEDSITAAVSPTHTN
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaagtccagatcgtacccctgactctactatgtcactgagcttactaatcatg
gatgcagaagagaaaccttctcaaccagataacaataatgaacagcctcatccaataaag
aatgagattgcggttgctcctaacagttctcaggatgctgccacaatagtccatcaaagg
gatgctgcaggtctaacaggttcatttgcttcaagtggagatcgctctgtttacccacct
aacatctatgctcctcaggcccagcccttctactatcgaggttatgacaatgcaagtggt
gaatgggatgaatatcctccatatgtcaatgctgagggaatggaaatcggatctcctggt
gtctataatgacaacccatctctgctgttccactctggatatggatacaacccgcaaatg
ccatatggaccatattccccagtcacaacaccgttgccttctgtaggtggagatgcacag
ttgtactccccccagcagttcccattctctgggccaccttattaccagcagttagtccca
cctagcatgccatatcttacttcaccaacaccggtttcacagccagagctcactgttgac
caacaaggtgatggcatgctttttggacaaaggcctggttttccacctgtgggatccttc
agcagaggcagttttcctggtggcctaggttttcacgattctctgcaaggaattgaagga
gtaagatctggaggaatatggtcagattggtctaaaccttcagacaggcagaggtctttt
atgcctttctcaccagctgtatctccacagcctgttggcacacttgggtcatttggacag
aatgttggaatggcttctcaacagcaaaaaccattgtatgggtttggatctggtttgaac
ccctataaccgaggctatctgcctagtggtttcaatcaggggtcaagctttggaagtgca
tccatttccagtttgggagcaaatggtcggagttggttttcactggagaataacaagaga
cacctcagggaaagtggttctctgtgcagttgtaatggtactcctgacatcctcagtgag
cagaacagaggaccaagagcctcaaagccaaagagtcaaaccatagctgacaataatcct
tctgttgaaaataataaacgtagcacttctactgccaagatccatgatgattcactcaac
cgaccagattttgtcacagagtacaatgatgctaagttcttcatcataaaatcttacagt
gaggataatgttcataagagtatcaaatatggtgtctgggccagcacaccaaatgggaat
agaaaattagatgctgcttatcgtgaagctcaggagaagcaagatacttgcccaatcttt
ctattcttttcggtgaatgccagtgctcagttttgtggggtggctgaaatgtttggacct
gttgattttgacaagagtgtggattactggcagcaagataaatggagtgggcaatttcct
gtgaagtggcatataatcaaagatgtcccaaacagtcagttccgtcacattgtacttgaa
aataatgacaacaagcctgtaactaacagtcgggacacacaggaggtgaagttggagcag
ggtattgagatgttgaacattttcaagaattatgaaacggatatgtccattctagatgat
tttgatttttatgaagagaggcagaaagccatgaaagaaaggaaagctcgacaacaaacg
ggtctgatggctgttggagtagttggagacagtgaacacagaaatgccgttacactatca
ggtgatttcatcaagcagatgtcaaagagttttgctcaagtcgtttgcatggatgagggt
agcaaagaggtaacaactcttggggaaagagctagttctgcctcagatggctcaatgggt
gccagagtcaaacttgaagattctattacagcagctgtctctcctactcataccaattag
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