KEGG   Carya illinoinensis (pecan): 122313380
Entry
122313380         CDS       T08745                                 
Name
(RefSeq) coilin-like isoform X1
  KO
K13150  coilin
Organism
cill  Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:cill00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122313380
Spliceosome [BR:cill03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    122313380
SSDB
Motif
Pfam: Tudor_Coilin Coilin_N DSPc
Other DBs
NCBI-GeneID: 122313380
NCBI-ProteinID: XP_042984259
LinkDB
Position
6:complement(23129113..23138974)
AA seq 620 aa
MESLRVRLDFEHRNVMNKSQLKEGLRRSWLLLKPEMKTISDLAAYLLRAFDLHDSCPSGL
ILSMDGFVLPSFESTCILKDRDIVCVKRKGDAVVNTIQAGEGFDSLEVEENVEKQPVLKG
VKLLSNEGFEKEHDENHASVHEYKVSRKRKASKKLQSSKYIWHIPFVRKKNKVATTVKCP
VLAEVDQKDVCAEETQSIHHRVVVPKKSLKQNKLLKLPGEQDKLSALESDDRSNDIAKSA
PSAKRFCQLQENSGGSVAVSCKPGESKKFPSRSARRKKAKRLWLREQVNIEKKKLLHQGQ
MLTKDDEQSPVKDDQKVFEEHHEPDENDDREDEVVPVVIRPGHIRFERLGKVYADQAVKK
NESQMELLRWNGMTSKKKGKKWGTKKVASYKRNDHASLNQKISEKQAAGEAATGDNPVDL
DKLKPYTSSPKEGDVVAYRLIELSSSWTPEVSSLRVGKISRYVPKSNRIMLVTVPEYPID
FEKITDTSLYGENGSLKISYSMLIDVRIVKHGNLGTTKTVTGEYNELFLGNRTPVSGVRV
GNNNKETPSRTPTLALGNGEVDAWDEISQALNAKKAQLSQQGGWSKEETSGKSAWSYTAS
RSSALGPTVTNAPLRAQNGQ
NT seq 1863 nt   +upstreamnt  +downstreamnt
atggagagcttgagggttcgtttggatttcgagcaccggaacgttatgaacaaatcacag
ttgaaggagggactcaggcgaagttggcttctcctcaaaccggaaatgaagaccatctcc
gacctcgccgcctatctccttcgtgcattcgacctccacgactcttgccccagtggcctc
atcctctccatggatggctttgtattaccgtcttttgagtcaacatgcattttgaaggat
agagatatcgtctgtgtgaaaaggaagggggatgcagtagtgaataccattcaggcaggt
gaggggtttgactctcttgaggtagaggagaatgtggagaagcaacctgtgcttaaaggt
gtgaaacttttgtcaaatgagggatttgaaaaggaacatgatgaaaatcatgcgagtgta
cacgaatacaaggtttccaggaaaagaaaggcatcaaagaaacttcagagctcaaagtat
atttggcacatcccatttgtgaggaagaaaaataaggttgctactactgtaaaatgtcca
gttcttgctgaagttgatcagaaagatgtctgtgctgaggagactcaaagcattcatcat
cgtgtagttgtcccaaaaaagagtctcaaacagaataagttattgaaattacctggtgag
caggataaattgagtgccctcgaaagtgatgatagaagtaatgacattgccaaatctgca
cctagtgcaaagagattctgccagcttcaagaaaacagtggaggaagtgttgcagtatcc
tgtaagcctggtgaatccaaaaagttccctagtagaagtgctcggcgtaaaaaggcaaaa
aggctgtggttgagggaacaagtcaatattgagaagaaaaagctacttcatcaggggcaa
atgctcacaaaggacgatgagcagtcacctgtcaaggatgatcagaaagtctttgaagaa
catcatgaaccggatgaaaatgatgatagagaggatgaggttgtcccagttgtaattaga
cctggacacattcgatttgagcgtcttggtaaagtgtatgcagatcaggctgtcaagaaa
aatgaaagtcaaatggagctcttgcggtggaatggaatgactagcaaaaagaagggtaaa
aaatggggcaccaagaaagttgcttcttacaaaaggaatgatcatgcgagtttaaatcaa
aagatttctgaaaagcaagctgctggagaagcagcaactggagacaatcctgtggatttg
gataagcttaagccttatactagctcgcctaaggaaggtgatgtagttgcatatcgtttg
attgagttatcatcgtcatggacccctgaggtttcttccttgcgagtagggaagatatca
cgctatgtccctaaatccaataggattatgctggtaacagttccagaatatccaattgat
tttgagaagataacagatacatccctttatggggaaaatgggtctttaaagataagttat
tcaatgcttattgacgtccgcattgtgaagcatggcaacttgggtacaacaaaaacagtc
actggtgagtataatgaactttttttgggtaatcgaacccctgtatcaggtgtcagggtc
ggcaataacaacaaagagaccccttcccgaacccctacccttgctctaggaaatggagaa
gtagatgcatgggatgaaatcagtcaggctttaaatgcaaagaaggctcagctctctcag
cagggtggttggagtaaggaagagacttctggcaagagtgcgtggtcctatacggcctcc
aggagcagtgcgctgggcccaacagtgacaaatgctcctttaagagcgcaaaatggacaa
tga

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