Carya illinoinensis (pecan): 122313388
Help
Entry
122313388 CDS
T08745
Name
(RefSeq) protein STICHEL
Organism
cill
Carya illinoinensis (pecan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaA_N-like_STI
AAA
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA_22
AAA_16
RCF1-5-like_lid
AAA_14
AAA_30
AAA_18
AAA_11
RNA_helicase
HMUDK_HMUD1
Motif
Other DBs
NCBI-GeneID:
122313388
NCBI-ProteinID:
XP_042984273
LinkDB
All DBs
Position
6:37040573..37048871
Genome browser
AA seq
1243 aa
AA seq
DB search
MSETRVGDPSKLHLKKELTQIRKAARVLRDPGTSSSWKSPLNSSRSVPPAASPSTWEHLL
QSDHFQNNNGKDKEKNVFLYNWKGHKSSTEKSAAMATIDDDDDGSSSSIPGGSVEDNLSD
GRDGRDSKSDSFPSIFRCRNANPVSSANIKKKKKKRKKSKKTNTNLDALSKYRHKDDIVG
RNLVNSKPPFQSHPSIGLSRDDSVGQSDDTEEYSNSEESRKILRASPLLLKLQHKNWSHS
SKLLRKSGLREDSSFSYSTPALSTSSYNRYRNQNPSTVGSWDGTTTSINDGDDEVDDHLD
LPGRQGCGIPCYWSKRTPKHRGVCGSCYSSSLSDTIRRKGSIMLCGSQVMYPRRPGSSSG
SNKRSIASRSAQGVFPLLGDCRGGSSIGTGRSDDELSTNFGELDLEALSRLDGRRWSSSC
RSQEGLEIVALNGEGEEEGTPDNIRSFSKKYKPMFFGELIGQNIVVQSLRNAVIRGRIAP
VYLFHGPRGTGKTSTARTFASALNCLAPDETKPCGYCRECTDFISGKSRDLLEVDGTNKK
GIDRVRYLLKKLSVESSSAFSEYKVFVIDECHLLPSKTWLAFLKFLEEPPERVVFILITT
DLDNVPRTVQSRCQKYLFNKIKDVDVVARLRNISANESLDVESDALDLIALNADGSLRDA
ETMLEQLSLLGKRITTSLVNELVGVVSDEKLLELLELAMSSDTVETVKRARELMDLGADP
MVLMSQLASLIMDIIAGTYNTIDAKCGDFFPGERSLTELEMERLKHALKLLSEAEKQLRV
SSERSTWFTATLLQLGSIPSPDFSHSGSSRRQSCKATEDDPSSASREATAYKQKWDAHHT
PRKPTSPASLQKAVSGNPNHLRELLSGVDGFSSNSNPKLSQSQSVDGGASAASCDNIMVG
NMMFRCINLEKLNDVWASCIERCHSKTLRQLLAVHGKLVSISEVEGFLVAFVAFGNREIK
CRVERFLSSITNAMEIVLRCNVEIRIILLPDSEASINIVKLVKLPEGLKKAETAAAVDQE
RKAVHPNPINGFSKRSLLLDGTYQSTSGSSDLTANGNGQTSSTRERRQEIPMQRIESIIH
EQRLETAWLQTAEKGTPGSLSRLKPEKNQVLPQNGIYCQDQMDSMNSMAFSSQHWEDELN
HEPKVNIGRVLRKDQNSKRIDRFPMSPSLLHDKSLAGNFSKNNLGYESGSGTGGCSGLFC
WNNAKPRKRERVKVTSVRPHKGGRFSLFGDCSRPKKTECGSRR
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacgagggttggtgatccaagcaagctacacttgaagaaggagcttactcaa
atccgaaaggcagcccgggttttacgagatcccggcacgagttcctcttggaaatcccct
ctaaattcctcaagatctgttccaccggctgcttctccttcaacttgggagcacttgtta
cagtctgatcatttccaaaataacaatggcaaggacaaggagaagaatgtgttcctgtac
aattggaaaggccacaaatcctcaaccgagaagagcgcagcaatggccacgattgacgat
gacgacgatggatcttcttcttcgattccggggggcagcgttgaagataacctgagcgat
gggcgtgatggtagggattcaaagagtgacagctttccttccatattcagatgtaggaat
gcaaatcctgtgtcatcggccaacattaagaagaagaagaagaagaggaagaagagtaag
aaaactaatacaaatttggacgctttatcaaaatatcgacacaaagatgatattgttggt
agaaacttagttaattcaaaaccaccattccagagtcatccttccatcgggttaagccgg
gatgactctgtcgggcaatctgatgataccgaagagtatagtaattctgaggagtctagg
aaaattttgagggcgtccccattgcttttgaaacttcagcataagaattggtctcactct
tctaagcttttgagaaaaagtggtctaagagaggattcttctttttcatatagtacaccg
gcattgtcgactagttcctataataggtatcgtaatcaaaacccaagtactgttgggtct
tgggatggtactactacttcaatcaatgatggggatgatgaggtggatgatcatttggat
ttgccgggtcgccaaggatgtgggattccttgttattggtcaaagaggacacccaaacat
cgtggtgtgtgtgggagctgttactcttcttcactttcagatacaataaggaggaaaggg
agcatcatgttgtgcggaagtcaagttatgtatcccaggcgtccaggatcatcatcaggt
tccaacaagcggagtattgcttcaagaagtgctcaaggtgtttttccattacttggtgat
tgcagaggaggttcatccataggaactgggcggagtgatgatgaactctctactaacttt
ggggagcttgatttggaagctttgagtagattggatgggaggagatggtcgtccagctgt
agaagtcaagaaggactagagattgtagctcttaatggggaaggggaagaggaaggcaca
ccggacaatatcaggagttttagtaagaagtacaaaccgatgttctttggtgaattaatt
gggcagaatattgttgtccagtcgctgagaaatgctgttataaggggtcggattgcccct
gtttatctttttcacggtccccgtggaactggaaagacatcaacagccaggacttttgcc
tctgccttgaattgtctggctcctgatgaaaccaagccatgtggttactgcagggaatgc
actgatttcatctctggcaagagtagagatctgttggaagttgatggaaccaataagaaa
ggaattgatagagttaggtacttattgaagaaactatcggtggagtcctcatcagccttc
tcagaatacaaggtttttgttattgatgagtgtcacttgttaccctctaagacatggctg
gcatttctcaaatttcttgaagaaccaccagagcgagttgtgttcatacttataacaact
gaccttgacaatgtacctcgtactgtacaatcacggtgtcagaaataccttttcaacaaa
attaaagatgttgatgttgtagccaggttacggaatatttctgctaatgagagcctggat
gttgaatcggatgcattggatttgattgctttgaatgcagatggttcacttcgagatgca
gaaactatgttggaacaattgagtttactggggaaaagaatcaccacatctcttgtaaat
gaactcgtgggagttgtttcagatgaaaaattactggaacttttggagttagcaatgtca
tcagacactgtagaaacagtgaaaagagccagggagttgatggacttgggggctgatccc
atggttttgatgtctcaactggccagtctcattatggatatcattgctggaacttacaac
acaattgatgctaaatgtggtgattttttccctggtgaaagaagcttgactgaattagaa
atggagagattaaagcacgctctgaagcttctttcagaggctgagaaacagctaagggtt
tcaagtgaacgctcaacctggttcacagcaaccttattgcagctcggttcaataccttct
ccagacttttctcactctggaagcagcagaaggcagagctgtaaggcaaccgaggatgac
ccatccagtgcttcaagagaagctactgcttacaagcagaagtgggatgctcaccatact
cctcgaaaaccaacttctcctgcttccctgcagaaggcagtaagtgggaatcccaaccat
cttagggaactgttgtcaggggttgacggtttcagctccaactccaatcccaagctgtca
caaagccagtcagttgatgggggtgcctcggctgcctcatgtgataatattatggttgga
aatatgatgtttagatgcataaacttagaaaagttgaatgatgtctgggcaagttgcatt
gagaggtgccattcaaagacactgaggcagctgctagctgttcatggaaagcttgtgtct
atatccgaagttgaaggttttcttgttgcttttgttgcatttgggaatcgagaaatcaag
tgtagagtggaaaggtttttgagcagtatcacaaatgcaatggaaatagttctgagatgc
aacgtggagattagaataatccttttgcctgacagtgaggcttctattaatattgtgaag
ctggtcaagttaccagagggtctgaagaaggccgaaacagctgcagctgttgaccaggaa
aggaaggcagtacacccaaacccaattaatggtttttctaaacgttctttgttgctggat
ggaacctatcaatctacctctggttcatcagacttaacagctaatggcaatggccaaacc
agtagtacaagagagaggagacaggagattccaatgcagagaatagaatccatcattcac
gagcaaaggctagaaactgcctggttacagactgcagagaaaggcacgcctggttcattg
agtcgtttgaaacctgagaagaatcaagtcctgcctcaaaatggcatatattgtcaagat
caaatggactccatgaactcaatggccttctcctctcagcattgggaagatgaattaaat
catgaacccaaagttaacattgggagggtcctccggaaggaccaaaatagtaaaaggatt
gatcgttttcccatgtcaccaagtttattgcacgataaaagcttagcaggcaatttcagt
aaaaataacctgggatatgaatcagggtctggaactggaggttgtagtggactcttctgt
tggaataacgccaaacctcgtaagagggaaagggttaaagtaacctctgttcggccacac
aaaggtggacggttttcattgtttggtgattgcagcagaccaaagaaaacagagtgtgga
tctagaagataa
DBGET
integrated database retrieval system