Carya illinoinensis (pecan): 122313535
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Entry
122313535 CDS
T08745
Name
(RefSeq) probable ubiquitin-conjugating enzyme E2 23 isoform X1
KO
K10581
ubiquitin-conjugating enzyme E2 O [EC:
2.3.2.24
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122313535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122313535
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.24 (E3-independent) E2 ubiquitin-conjugating enzyme
122313535
Ubiquitin system [BR:
cill04121
]
Ubiquitin-conjugating enzymes (E2)
Ubiquitin-conjugating enzymes
122313535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tSH3-B_UBE2O
UQ_con
SH3-B_UBE2O
SH3-A_UBE2O
SH3-C_UBE2O
TrAA12
RWD
Motif
Other DBs
NCBI-GeneID:
122313535
NCBI-ProteinID:
XP_042984560
LinkDB
All DBs
Position
6:31813015..31820370
Genome browser
AA seq
1165 aa
AA seq
DB search
MVLLMENESYDSVGKVNEPATRAHDDNSSHQSGSATSGLFCDSSVDSETNEVSKPNNADS
NNQNIPHMYRQDVVKSNSSGMIGIVTEVAGDTDSDSSINNDEDEDDDSDDEDNNGENEEE
DGDGNSNANGDSDSDGEGGGGESGPLPADQVRVLWMDKTESTISLNDVAVVDRGFLHGDF
VATALDPTGQVGVVVNLSTSVDLLSSDGSIMKDISSKDLKRIRDFTVGDYVILGPWLGKI
EDVLDNVTVLFDDGSVCKVPKVEPLKLKPISKNILEDGHFPYYPGQRVRASSSSLFKNSR
WLSGLWKPNRLEGTVIKVTVGSVFIDWITSASYGPNSSTPPAEEQSPKNLKLLSCFSHTN
WLLGDWCILPKLALSSSIPLDSGLSKLELQHSINCELDSTQMGSGCDSEEVSLEESDENN
ESMDLDPVDAVDGIDRNFQINEPESSSCCSSLSVSKEPVHESWPLHRKKICRVVVRRDKK
ARKKEESFEKALLIVNTRTKVDVAWQDGTTGCGLDSTSLIPIDSPGDHEFVAEQYVVEKV
SDDGDDVGEVRRVGVVKSVNGKERTACVRWLQPVAQAEDPQEFDKEEIVSVYELEGHPDY
DYCYGDVVVRLSPVSVSSETATGMDSVPQSKQQNRPNEIRRDVTKHSGCRSVEDSSGNKF
WGGFSDLSWVGNITGLRNGGIEVTWADEMVSTVGPQAIYVVGRDDDSVAAGSEVSDDATS
WETVNDNEMDTLENVQEEDELHNANYVDSEPEKCGENSSKNTALSVPLAAFRFVSRLATG
IFSLGQKNLDPCSLDSKVEGELESIRTIQISEGKDSSDEYSSQKPNIIDSCGTEIKEEQD
ISEAHELFEVAEASCDLRAEESNAPAYLGDDICCFKHFDIAKNPVDHYFLGAYGQNDNGR
RWFKKVQQDWSILQNNLPDTIYVRVYEDRMDLLRAVIVGAYGTPYQDGLFFFDFHLPPEY
PDAPPLVSYHSGGWRINPNLYEDGKVCLSLLNTWTGKGNEVWDPKSSSILQVLVSLQGLV
LNSKPYFNEAGYDKQIGTAEGEKNSLSCNENTFLLNCKTMMYLMRRPPKDFEELVKDHFS
KRGYYILKACDAYMKGCLVGSLTEDASVSDKNNVNSTSVGFKLMLAKILPKLFLLLSGVG
ADCHEFKHLLQSFSVIGGPNIGQAN
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggttcttctaatggaaaatgaatcatatgactctgttggtaaagttaatgagcctgcc
acgcgtgctcatgatgataattcttcgcaccaaagtggttctgccacaagtgggcttttt
tgtgattcaagtgtagatagtgaaactaatgaagttagcaaacctaataatgcagacagt
aacaaccaaaatattccacatatgtataggcaagatgttgtaaaaagcaatagcagtggc
atgattgggatagtgactgaagttgccggtgacacagattcagatagcagcattaacaat
gatgaggatgaggatgatgacagtgatgatgaagacaacaatggcgagaatgaggaagaa
gatggtgatggaaatagcaatgccaatggcgatagtgatagtgatggggaaggaggtggt
ggcgagagtggtcctcttccagcagaccaggtgcgagtactttggatggataaaactgag
tcaaccataagtcttaatgacgtagcagttgttgatcgtggattcttacatggggatttt
gttgccactgctttggacccaactgggcaagtgggtgttgtggtaaatctgagtacctcc
gttgatttgttatcttctgatggatctattatgaaagatatttcatccaaagacttgaaa
cgcataagggatttcactgttggtgactatgtgatcttgggtccctggctaggtaaaatc
gaagatgttttagataatgtgactgtgttgtttgatgatggttctgtgtgtaaggttcca
aaagttgagccactgaagctaaaaccaatttccaagaatatcctcgaagatggacatttt
ccttactatcctggccagcgtgtaagggccagttcttcatcacttttcaagaattccagg
tggctgtctggcttgtggaaacctaatcggttggaaggtactgttataaaggttacagtt
ggttcagtttttattgattggataacatctgccagctatggaccaaattcttcaactccc
cctgctgaagagcagagtccaaaaaacttaaaactgttgtcttgtttttcccatacaaat
tggctattgggtgactggtgtattctccccaaattggctctttcgtcttccattccctta
gacagtggcttatcaaaattagaacttcaacattcgatcaactgtgagttagattctact
caaatgggaagtgggtgcgattcagaagaggtttcattggaggaatcagatgaaaataat
gaatccatggatcttgatcccgttgatgcagtggatggaattgatagaaactttcaaatc
aacgagcctgagtccagctcttgctgtagttcattgtctgtttcaaaggagcctgtccat
gaatcttggcctcttcatcgcaagaagatctgtagagtagttgttaggagggacaagaaa
gctcgaaagaaagaggaaagttttgaaaaagcccttttgattgtcaataccaggacaaag
gttgatgtggcatggcaggatggaacaacaggttgtgggctggattcaacaagtttgatt
ccgattgatagtcctggtgatcatgaatttgttgcggagcagtatgtggtggagaaggtc
tccgatgatggggatgatgttggagaagtcaggcgtgttggggttgtgaagagtgtgaat
ggcaaggaacgaacagcttgtgtaaggtggttacagccagttgcccaggcagaagatcct
caagagtttgataaagaggaaattgtaagtgtgtatgagttggagggacatccagattat
gattactgctatggggacgtagttgttcgattgtctccagtttctgtttcttcagaaaca
gctactggcatggactccgttcctcaatcaaagcagcagaataggccaaatgagattaga
cgggatgtcacaaaacactctggatgtagaagtgtagaagattcatctggaaataaattt
tggggtggcttctccgatctctcttgggtcgggaatataactggtctaaggaacggtggt
attgaagttacatgggctgatgagatggtttcaacggttggacctcaagcaatctatgtt
gttggtcgagatgatgattcagttgcggctgggagtgaagttagtgatgatgctactagt
tgggaaactgtcaatgacaacgagatggataccctcgagaatgttcaagaggaagatgag
ctgcataatgccaactacgtagattctgaaccagaaaaatgtggagagaattctagcaaa
aatacggcactgtcagttccattagctgcatttcggtttgtgtcaagactggccactgga
atattctcactgggacaaaagaatttagatccatgcagtttggattccaaagttgaaggt
gagctcgaatccatccggacaatacagatttctgagggaaaagactctagtgatgagtat
agttctcagaaaccaaacatcattgatagctgtggtactgaaattaaagaagagcaggac
atttctgaggcacatgaattgtttgaagtagcagaagcttcatgtgatttgagggctgaa
gagtcaaatgctccagcatatttaggggatgacatttgttgtttcaaacactttgatata
gctaaaaatcctgtggaccattattttcttggtgcatatggacagaatgacaatggaagg
aggtggtttaagaaggttcaacaagattggagcatacttcagaataaccttcctgataca
atctatgtgcgagtttatgaagatagaatggatctcttaagggcggttatagttggggca
tacgggacaccttaccaagatgggctcttcttcttcgattttcacctcccaccagaatac
cctgatgcaccaccattggtatcctatcattcaggtggctggcggataaatccaaattta
tatgaggatggcaaggtgtgccttagccttctgaatacttggactggaaaaggaaatgaa
gtttgggatccaaagtcttctagcatcctacaagttctagtttcacttcaggggttagtg
ctaaattctaagccatattttaatgaagctggctatgacaagcagattgggacagctgag
ggagagaaaaattcattgtcttgcaatgagaatactttcttgctgaactgcaagacaatg
atgtatcttatgaggaggcctccaaaggacttcgaagagcttgttaaagaccatttcagt
aagcgtggatattacatacttaaggcctgtgacgcttatatgaaaggttgtttagtaggc
tctctcactgaggacgcctctgtgagtgataagaacaatgtcaattcaacttcagttggt
ttcaagctgatgctagcgaagatattaccgaagcttttcttgctactcagtggagttgga
gctgattgtcatgaattcaagcatctgttacagtcttttagtgtaattggaggacccaat
atcggtcaagccaactag
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