Carya illinoinensis (pecan): 122313586
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Entry
122313586 CDS
T08745
Name
(RefSeq) transcription factor TFIIIB component B''-like isoform X1
KO
K15198
transcription factor TFIIIB component B''
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cill03021
]
122313586
Transcription machinery [BR:
cill03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
122313586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-bind_7
Myb_DNA-binding
Myb_DNA-bind_6
SANT_DAMP1_like
Motif
Other DBs
NCBI-GeneID:
122313586
NCBI-ProteinID:
XP_042984642
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Position
6:33006396..33015592
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AA seq
810 aa
AA seq
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MDLDDPFCDDILETVKSKPKAGGKFQPKAKASVKNGTSTSVPSAPSGSIDENSVRLTPSG
LETKQYARPVVAEDKLTTADGISAATSEIVCINQKSKDNESSFADNKSLESVKTSSQHVM
GEDIGSKDALHPEVGTSESNIGWHSCIGILSAEIDSMEFELEPFGGILSEADATNGNDDR
EGSLSHSKMPTFLDFNNKDSVEHFGIRACNSVDSSALGPCDAAEPQTRPDAHTNQDTVTC
REAGVSNKGVDVRIDNGRSETEFQEAGAFSGMEDLDFMSQDNIPFGLHAGKFRPKPKMKA
IKEKPSTDTSHPEVESVMHSQTPELVPSYTGYANVNSVSAFPADDLQDNSMRFDDFITLD
PTSEISMNEESINLAKTYSDGPVPRDTLHSEDVPEILTELDSNCRRGEASTSSDLLQKCK
RSATADEENNDGKSSGNLNNDGKSLRKLRKKVSFQLIDEPDGEVNENGGFSGEPPTDSNI
GEVEDRDDDDEYRVESDEEFRVESMSQKKRAPRKSKKSGVENGKPVQKRKKANEAADQST
KEPPKKFSHSTRRNRRRVDKVLLETPEDEIDPQRLPIKDLILLAEYKERLASKEAETSKT
PLTNLRSYNSFPRESSYNGEATFVSEQGRGSDDDQPSYEVPTDPFVNYQSFMDKTPSTRW
SKQDTELFYEAVRQFGTDFSMIQQLFPGRTRHQVKLKFKKEERQYPLRLSEALTSRAKDH
SHFHLVIERLQQASQAEDAYVDDEVARTGKEEEEIVELTTQAKEEVAKPEQDGEVVVEDQ
EADLGEVHSPAKSDAGDDNLYDWSQYKSDY
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggatttggacgacccattttgtgatgatattctggagacagttaaaagtaaacccaag
gctggtggcaagtttcaaccaaaggctaaagccagtgtgaaaaatgggacttctacatca
gttccatcagctccttcaggttctattgatgaaaattctgttagactaaccccctcaggc
ttagagactaaacaatatgctcggcccgttgtcgcagaagataaattgacaactgcggat
ggaatttctgcagctacctcagagattgtatgcattaaccagaaatcaaaagacaatgaa
agctcttttgctgacaacaaaagcttggaatcagtcaagacctcatcccaacatgtgatg
ggagaggatattggctctaaagatgctctgcatccagaggttggaacatctgagagcaac
attggttggcattcctgcataggaatcttgtcagcagagatagactccatggaatttgaa
ttggagccctttggaggtattctttctgaggctgacgcaacaaatggtaatgatgatcgg
gaaggttccctttctcattcaaaaatgcctacttttcttgatttcaacaataaggattca
gtggagcattttggtattcgggcatgtaattctgttgactcttcagcactcgggccatgt
gatgctgcagagcctcaaactcgtcctgatgctcatacaaaccaagatacagttacttgc
agggaagctggtgtttctaacaagggtgtagacgttcggattgataatggaaggtcggaa
acagagtttcaggaagctggggccttttctggcatggaagatctagattttatgtctcag
gacaatattccatttggactgcatgctggcaagtttcgacccaagcccaagatgaaagca
ataaaagagaaacctagtactgacacctctcacccagaagttgagtctgttatgcattca
caaactcctgagttggttccttcttacactggatatgcgaatgtgaactcagtttctgcc
ttcccggctgacgatttacaagataactccatgaggtttgatgattttattacattggac
ccaacttcagaaatttcaatgaacgaagaatcaataaatcttgccaaaacttactccgat
ggccccgttccgagggatactctgcattcagaggatgttcctgaaattctaacggaactg
gattctaactgtagaagaggagaagcttctacatcatcagatcttcttcaaaaatgcaaa
agatctgctacagctgatgaagagaacaatgatggcaaatcatcgggaaatctaaacaat
gatggcaaatcgttgagaaagttaaggaaaaaagtatcttttcaacttatcgacgagcca
gatggtgaggttaatgaaaatgggggcttctctggtgaacctcccactgattctaatata
ggcgaagttgaggaccgtgatgatgacgatgaatatagagtggaaagtgatgaggaattt
agagtggaaagtatgtcccagaagaaaagggctccaagaaagtcaaagaaatctggggtt
gaaaatggtaaacccgtacaaaagcgcaagaaggccaatgaagcagctgaccagtcaacc
aaagaacctcccaaaaaattttctcattcaacgcgtcgaaacaggagacgtgtggataag
gtgttacttgaaacaccagaggatgaaattgaccctcaaaggttgcctatcaaggatctc
attttgctcgctgagtacaaggagcgactagcgagcaaagaggcagaaacgtcaaaaaca
cccttgaccaatttaaggtcttacaattcctttcctagggaatcatcttacaatggagag
gctacttttgtttcagaacaaggcagaggttctgatgatgatcaaccaagttatgaggtt
ccaactgaccctttcgttaattaccagtctttcatggacaaaactcccagtacaagatgg
tcaaaacaagacacagaactgttctatgaggctgttcggcagtttgggacagatttttct
atgatacaacaactttttcctggtcgaactcgtcatcaagtcaagttgaaatttaagaag
gaagagcgtcaatatccattacggctttctgaagccctaactagtcgtgctaaagatcat
tcccatttccacttggtgattgagcggttgcagcaagcttctcaggcagaagatgcttat
gtagatgacgaggttgcaaggacaggcaaggaggaggaggagatagtggaattgactact
caagcgaaggaggaagtggcaaaacctgagcaggatggggaagtagtcgttgaagatcag
gaagcagatttgggtgaagttcatagtcctgcaaagtctgatgcaggcgatgataacctc
tatgactggagtcaatataaaagtgattattag
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