Carya illinoinensis (pecan): 122313736
Help
Entry
122313736 CDS
T08745
Name
(RefSeq) tRNA pseudouridine synthase A-like isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122313736
Enzymes [BR:
cill01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
122313736
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122313736
Prokaryotic type
122313736
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF835
Motif
Other DBs
NCBI-GeneID:
122313736
NCBI-ProteinID:
XP_042984866
LinkDB
All DBs
Position
6:complement(36681116..36688330)
Genome browser
AA seq
372 aa
AA seq
DB search
MTEKPKHLLDSVSESPKRPPEVPKTASEYISADEEEQQQQVSMSPNPGNGIQRYLVAIEY
IGTRFSGSQHQPNCRTVVGALKEAFRKFIGQPVSICCSSRTDAGVHAVSNVCHIDVQRIS
KRKPGEVLPPHEPNVVRRAVNHFLQRNEGDIMVIDVRCVPADFHARFKAQERTYFYRLLS
GPEPLSIFEKDRAWHVPEELDIPSMQEACKVLVGHHDFSSFRAAGCQAKSPIRTLDELNV
TEVVSTPYFPSLIERRQENLTKADVCASSNKPENDLPLRSIEGASDYNGATVLGFGARRR
HRCFVITARARSFLYHQVRLFVGVLKAVGTGGLAISDVERILNAKTVTAASPMAPACGLY
LGRVKYDLPREE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaaacccaagcacttgctagacagtgtctcggagtctcctaaaaggcctccc
gaagtcccaaaaaccgcctccgagtacataagcgccgacgaagaggaacaacagcaacaa
gtatctatgagtccgaacccgggaaatggaattcaacgctacctggtcgcgatcgagtat
attgggactcgtttttctgggtctcagcaccagcctaattgccgtacggttgttggcgct
cttaaggaagcttttcgtaaatttattggccagccagtttcaatttgttgttcaagtcga
actgatgcaggagtgcatgccgtatcaaatgtctgtcacatagatgttcagcgcataagc
aaaaggaagcctggggaagtgttaccacctcatgagcctaatgtggtcagaagagctgtg
aaccatttcttacagaggaatgaaggtgatataatggtgattgatgtccgatgtgttcca
gcagattttcatgctagattcaaagctcaagagcgcacgtatttctaccgcttgctatct
gggccagagcctttgtcgatttttgagaaggaccgggcgtggcatgttcctgaggaatta
gatattccttctatgcaggaagcatgcaaagttcttgttggccatcatgattttagctcc
tttagagcagctggttgtcaggcaaaatcaccaattagaactttagatgaactcaatgtt
accgaggtagtttcaactccatattttccatcactgattgagaggagacaagagaattta
accaaggcagatgtttgcgcaagctctaacaagcctgagaatgacctgcctcttagatcc
attgagggggcaagtgactataatggtgcaactgttcttggatttggcgcaaggagaagg
catcgttgctttgtgataacagcacgggcacgttcttttctttaccaccaggttagactg
ttcgttggtgttcttaaagctgttgggactggaggattagcaatctcggatgttgaaaga
atcctaaatgcaaagactgtgactgctgctagtcccatggcccctgcctgtggtctctac
cttgggcgtgtaaaatatgatctgccaagagaggagtaa
DBGET
integrated database retrieval system
