Carya illinoinensis (pecan): 122313757
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Entry
122313757 CDS
T08745
Name
(RefSeq) adagio protein 3
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122313757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122313757
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122313757
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Kelch_2
Beta-prop_ATRN-LZTR1
Kelch_5
Kelch_1
Kelch_6
PAS_9
NANM
F-box-like
PAS_3
PAS
F-box
PAS_4
PAS_8
Motif
Other DBs
NCBI-GeneID:
122313757
NCBI-ProteinID:
XP_042984902
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Position
6:complement(11224361..11228346)
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AA seq
632 aa
AA seq
DB search
MAMAKEREEKEQVRSSGGKRLKCARGEEREPVEEQEKEEVEEEESELPVKPGFSYPMTPT
SFVVSDALEFDFPVIYVNKVFELFTGYRADEVLGRNCRFLQFRDPHAQRRHPLVNPVVVS
EIRSCLEVGVAFQGELLNFRKDGTPLVNMLRLVPIHDDDGIMTHIIGIQVFSEAKIDLNH
ESYPVFKETCDQQLDQSGKYSAMSAAQSPFHQHQEICGMLQLSDEVLAHNILSRLTPRDV
ASIGSVCRRIRQLTKNEHVRKMVCQNAWGREVTGTLELLTRKLGWGRLARELTTLEAVCW
RKLTVGGAVEPSRCNFSACAAGNKLVLFGGEGVDMQPMDDTFVLDLDTANPEWHRMSVKS
SPPGRWGHTLSCLNDSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWREVFCGTPPLPRSWH
SSCTIEGSKLVVSGGCTDSGVLLNDTFLLDLTTEKPMWSEIPTSWAPPSRLGHSLSVYGK
TKILMFGGLAKSGNLRLRSGEAYAIDLEDEKPQWRLLECSAFTGTGSQSAVVPPPRLDHV
AVSMPCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRILNVPGQPPKFAWGHSTCVVGG
TRVLVLGGQTGEEWILNELHELCLASRLDSDL
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggccatggctaaagagcgagaagaaaaggagcaggttcggagctcgggagggaagaga
ctaaaatgtgccagaggagaagagcgtgaacctgtggaagagcaagagaaagaagaagta
gaagaagaggaaagcgagctccctgtgaagccgggattctcttacccaatgacgcccacc
tctttcgtggtatccgatgcacttgaattcgatttcccagtcatttatgtcaacaaagtc
ttcgagctcttcactggctaccgtgccgacgaggtcctcggtcggaactgtcggttttta
caatttcgggatccccatgctcaaaggcggcaccccttggtgaatcctgttgttgtttct
gagattagaagctgtctcgaggtaggtgttgcatttcaaggcgagctcctcaatttcagg
aaggatggcactcccttggtaaacatgctaagacttgtacctatccatgacgacgatgga
attatgacacatattataggtattcaagttttttctgaagcgaaaatagatctgaaccac
gaatcatatccagtttttaaagagacttgtgatcagcagcttgatcagtcaggaaaatat
tctgcaatgagtgctgctcaatcaccattccaccagcatcaagaaatatgtggaatgcta
cagctctcagatgaagtcttggctcacaacattttatcgcgcttgacaccaagggatgta
gcatccattgggtctgtctgcagaaggatccgtcaattgacaaagaatgagcatgtgagg
aagatggtatgccaaaatgcttggggaagagaagtaacgggtacattggaactgctgaca
aggaagttagggtgggggcgcctggccagggaactgactactcttgaggctgtttgttgg
aggaaactgacagttggaggtgcagtggaaccttcacgttgcaatttcagtgcttgtgca
gctggtaataagcttgtattgtttggaggggaaggagttgatatgcagccaatggatgac
acatttgttctcgatcttgatactgcaaatccagagtggcatcgcatgagtgtgaaatca
tcccccccagggcgctggggccatactctctcatgtttaaatgattcttggttggtggtt
ttcggaggatgtgggcggcaaggattgctcaatgatgttttcgttctagacttggatgcc
aaacagccaacgtggagagaagtcttctgtggaactccccctctccctagatcttggcat
agctcttgcacaatagaaggttctaaattagttgtctcaggtggatgcacagattcgggg
gtacttcttaatgacacatttttgttggatctcacaacggagaaaccaatgtggagtgag
attcctacttcttgggctcctccctcgaggttaggacattcactttcagtttatggtaag
accaaaattcttatgtttggtggacttgccaagagtgggaaccttcggttgcgatcaggt
gaggcttacgctattgatttagaagatgaaaagcctcagtggaggctactggaatgtagt
gcattcactggcacgggtagccagagtgctgtggttcctccacctagacttgatcatgtt
gcggtcagcatgccttgtggtaggattatcatttttggtggttccattgccgggcttcac
tccccttcacagctatttcttttggatccttctgaggagaaaccatcatggaggatcctc
aatgttcctgggcaaccacctaaatttgcttggggtcatagcacttgtgtggttgggggg
actagggtcctagtattgggtgggcaaacaggagaggaatggatacttaatgaattgcat
gagttgtgcttggcgagcaggctggattcagacctgtaa
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