Carya illinoinensis (pecan): 122313837
Help
Entry
122313837 CDS
T08745
Name
(RefSeq) trafficking protein particle complex subunit 11 isoform X1
KO
K20308
trafficking protein particle complex subunit 11
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122313837
Membrane trafficking [BR:
cill04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
122313837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
Gryzun
TRAPPC13_C
Gryzun-like
Motif
Other DBs
NCBI-GeneID:
122313837
NCBI-ProteinID:
XP_042985040
LinkDB
All DBs
Position
6:complement(6222113..6227719)
Genome browser
AA seq
1179 aa
AA seq
DB search
MEEYPEELRTPPVSLVSLVGCPELHAAISKHLHSEQPPINTLALPDFSKVSLFSRTPKGD
DPSPAHVVPGILKRDWLLKHRTRVPSVLAALFSSDQLSGDPAQWLQVCSLLDQIKAVLRS
RNIKFLLVVVVPHGDDIGEDRMLALRKRAELDSKYVVILKPDEPSELKQSLSRLGSALAE
LANTYYRDEGKRVKLRIEKKTSSSSSIELHIRYCFKVAVYAEFRRDWAEALRFYEDAYHT
LREMVGTSKRLPAIQRLVEIKTVAEQLHFKISTLLLHGGKVGEAVTWFRQHNGSYRRLVG
TPEAVFLHWEWMSRQFLVFGELLDKSSAAITNISSLALGTADKPLSEWESRPAYYYQLAA
HYLKEKRACLELALSMSETGNEMDNGAESVVPSAYVGQFARLLEQGDEFAMQSLTDEEYI
RFAVVEGKRFQDSYEIIALLKKSYESYSNLKVQRMGSFCGFQIGKEYYMAGEFNNAKQLF
DDIASLYRREGWVTLLWEVLGYLRECARKYGTVKELIEYSLEMAALPVSSGTDTQMKYRE
NGPAGPASLARREEIHKDVFGLVIGESGLSSVERNDDLKITLDNPLHLEIDLVSPLRLVL
LASVAFHEQKIKPSAPTLITLSLLSQLPLTVEIDRLEVQFNQSNCNFIIMNAQRPPLAAT
ADDKQGHRVETSSSLTLSTNKWLRLTYDVKSEYFMTDSDQSGKLECTSVIAKMGPYFTIC
CRAESPASMEDLPLFKFEDRVETSPTKDPALAFTGQKATQIEEPDPQVDLNLGASGPALV
GERFIVPVTVSSVGHAVYSGELKINLVDVRGGSLFSPRETEAYSLDSHHVELVGISVPEG
KDETQLDTDEINKIQKSFGLFSVPFLKCGESWSCKLEIKWHRPKPVMLYVSLGYSPYSFE
STAQKVNVHKSLQIEGKTAIVISHRFLLPFRQDPLLLSRIKAVADSDLPASLPRNETCIL
LVSAKNSAEVPLKLLGMTLQEDNEDTGRPCSVRHEGEDLLEPALLVPGEEFKKVFTVISE
DDSSKLTIGTACVTWTRDSGSKAASVLTKQTLPDVNVESPPLVVSLDCPPYAILGDPFTY
LVKIRNQTQLLQEVKFSLADAQSFVLSGSHNDTVFVLPKSEHILSYKLVPLASGVQQMPR
FTVTAVRYSAGFQPSIAASTIFIFPSKPHFKGADVGTGG
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtacccggaggagttaaggacaccgccggtgagtctggtatcgctggtggga
tgtccggagcttcacgccgccatttcaaagcaccttcattcggagcagccaccaatcaac
accctcgctctccctgacttctccaaagtctctctattctctaggacccccaaaggcgac
gatccttcccctgctcatgtcgttccgggcatcttgaagcgggattggctcctcaagcac
cgcactagggttccctccgtgctcgccgctctcttctcttccgatcagctctctggcgac
cccgcccagtggctccaggtctgctccctcctcgatcaaatcaaagccgtccttcgttcc
cgaaacattaaatttcttcttgtggtggtggtgccgcatggagacgatattggcgaagat
cgaatgcttgctctacgcaagcgtgccgaactggattcgaaatacgttgtcatccttaag
ccggacgagccctccgagctcaaacagtcactcagcaggcttggatccgccctggcagaa
ttggccaatacatattacagagatgaaggaaaacgagttaaattgcgtattgaaaagaag
acctctagttcttctagtattgagttgcacattcgttattgcttcaaagttgctgtgtat
gcagagttccgaagagattgggctgaagctttgagattttacgaagatgcctatcataca
ctgcgagagatggttggtacatcgaaaaggttgccagctattcaacgcttagttgagata
aaaactgtggcagagcaattgcacttcaagatatcaactctgttattgcatggtggaaag
gttggggaagcagttacgtggttccgccagcataatggttcttatagaaggctggttgga
accccagaagccgtctttcttcattgggagtggatgagtagacaatttttggtattcggg
gagttgctggacaaaagttcagcagccattacaaatatttcatctctagctttaggtaca
gctgacaaacctttgtccgagtgggaatctcgtccagcgtattactatcagttagctgct
cactacttaaaggagaagagagcttgtttggaacttgcgctctcaatgtcagaaactggt
aatgagatggataacggtgctgagtctgtggtaccttcagcttatgttggtcagtttgct
cgattactggagcaaggggatgaatttgctatgcagtctctcactgatgaagaatatatc
cgttttgctgttgtggaaggaaaaaggtttcaagattcatatgaaataattgccttgttg
aaaaaatcttatgaatcatatagtaatctcaaagtccagaggatgggctctttctgtgga
ttccaaattggcaaggaatattatatggctggtgaatttaataatgcgaaacagcttttt
gatgatattgcaagtctgtacagacgagaggggtgggtcactttgctttgggaagtcttg
ggttacctgcgggaatgtgcaaggaaatatggtactgtgaaagaacttatagagtactca
cttgaaatggctgcgctgccagtatcatctggtactgatacccagatgaaatatagagag
aatggtccagctggtcctgcaagtttggcacggagagaagaaatacacaaggatgttttt
gggcttgtcattggggaatcagggctatcatcagttgagagaaatgatgatctcaaaata
actctagataatccacttcaccttgagattgatcttgtcagtccattaagattggtgctt
cttgcttcagttgcatttcatgaacaaaaaatcaagccaagtgcacccactttgattaca
ctctccctattatcacaattacccctgactgttgaaattgatcgattagaagtgcaattc
aatcaatctaattgcaactttatcatcatgaatgcccaaagacctcctctagctgctaca
gctgatgataaacaaggccaccgagtagaaacttcttcttctctgacactttctacaaac
aaatggctacgtttgacatatgacgtcaaatctgaatattttatgactgattcagatcaa
agtggaaaacttgaatgcacatctgttattgcaaaaatgggaccgtacttcacgatctgt
tgcagagctgaaagtccagcttcaatggaggatttaccacttttcaagtttgaagaccgt
gtagagacttctccaaccaaggatcctgctctagccttcactggtcagaaggctacccag
attgaagaaccggacccgcaagtagatcttaatttaggtgcttctggccctgcacttgtt
ggagagaggttcatagtacctgttaccgtgagctctgtgggccatgcagtctactctggt
gagttgaagatcaatctggtggatgtaagaggtggcagcttgtttagtcctagggaaaca
gaagcatactctttggatagtcatcatgttgagcttgttggcatctctgttccagaagga
aaggatgaaactcaattggatacggatgaaatcaataaaattcagaagtcttttggattg
ttttctgttccatttctgaaatgtggagaatcatggtcctgcaaactcgaaatcaagtgg
catcggcccaaacctgtaatgctttacgtatcgttgggctattctccgtatagctttgaa
tcaactgctcaaaaggttaatgtccacaagagcttgcaaattgaaggaaagactgctatt
gtaattagccatcggtttctgctgccatttcgtcaggacccattgttgctatctaggatc
aaggcagttgctgattctgatctgccagcatcactgcctcgtaatgaaacatgtattctc
cttgttagtgctaagaactctgcagaggtgccattgaagttactaggcatgactcttcaa
gaagataatgaagacactggaaggccatgttctgtgcgacacgagggtgaagaccttcta
gaacctgcccttcttgtgccaggagaagagttcaaaaaggtttttacggtcatttctgag
gatgattcttcaaagcttacgatagggactgcgtgtgtaacatggacgagggattctggt
tcaaaagcagcttcggttttgactaaacaaacccttcctgatgtaaatgtggagtcacct
cctctggttgtgagtttggattgtcccccatatgccatccttggtgatcccttcacatat
cttgtcaaaattcggaaccaaacacaactgcttcaagaggtaaaattctcattggcagat
gcacagagttttgtgttatctgggtctcataatgacacggtttttgttcttccaaaatct
gagcatattctcagttacaagcttgtaccacttgcctcaggcgtccaacagatgcccaga
tttaccgtgacagcagtaagatactcagctgggtttcaaccctcaattgctgcatctact
atattcatatttccctcgaagcctcacttcaagggggctgatgtggggacaggaggatag
DBGET
integrated database retrieval system
