Carya illinoinensis (pecan): 122313936
Help
Entry
122313936 CDS
T08745
Name
(RefSeq) E3 ubiquitin ligase BIG BROTHER-related-like isoform X1
KO
K19045
E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:
2.3.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122313936
Enzymes [BR:
cill01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122313936
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122313936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_16
zf-RING_UBOX
zf_RING_Vps8
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
FANCL_C
zf-RING_Vps41
PHD_NSD
PHD
zf-C3H2C3
Motif
Other DBs
NCBI-GeneID:
122313936
NCBI-ProteinID:
XP_042985206
LinkDB
All DBs
Position
6:20971746..20978587
Genome browser
AA seq
383 aa
AA seq
DB search
MENKSNAGSDAKVGSECAKPNLTNHHEDPNYVHVEEQEQEVEVGGSGIEQAPQPPRQPPR
TPFTNLSQVEADLALARTLQEQERAFMMLQMNNEGSDYGSWEGGSYAYDDEDDFDDPHED
TDEDDEEGYDGTNLDDDEDAFDVHAHDMAEEENDPRVEFDPAVFLSDEVYARALQDAEDI
EMAARLFVLAGLNDREADIEDHGGYSLTTEVEEDTWEEVDPDELSYEELIALGEVVGTES
RGLSADTIASLPSVNYKSGSNQNGNNDSCVICRLDYEDGETLTVLSCKHSYHSECISDWL
KINKMIVRPPLSCVCEESLENEGSDREKQSFAIRKIYSVIAPEVVLTLKKVSEGEVVTST
SSACQLKEEIQFIECRGYLLLLS
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacaagagcaacgcaggcagcgatgccaaagttggttccgaatgtgccaagcca
aatcttaccaaccatcatgaagaccctaattatgtgcatgttgaggaacaagaacaggaa
gtagaggtaggcggatccggcatcgagcaagctcctcagccgccgcgtcagccccctaga
accccctttactaatctaagtcaggtcgaggctgacctcgctctcgcacgtacccttcag
gagcaggaaagggcattcatgatgctccaaatgaacaatgaaggaagtgattatggaagt
tgggaaggtggaagctatgcatatgatgacgaggatgattttgatgatccccatgaggac
actgatgaggacgatgaggagggatacgatggaaccaaccttgatgatgatgaggatgct
tttgatgtgcatgctcatgatatggctgaagaggaaaacgacccccgtgttgaattcgat
ccagctgtctttttaagtgatgaggtctatgcaagagccctacaagatgctgaagacata
gaaatggctgctagactgtttgtgcttgcagggttaaatgatagggaagctgacatagag
gatcatggtggttactctctgacaacagaagtggaagaggacacgtgggaggaggttgac
cccgatgagctttcctatgaggaattgattgcgcttggtgaagtagttggaactgagagt
agagggctttcagctgatacaattgcgtctttgccttcagtaaattataaatcaggaagc
aatcagaatggaaacaatgattcatgtgtcatttgtcggttggactacgaggatggtgaa
acattgacagtgctttcttgcaaacattcttaccattctgaatgcataagcgattggttg
aaaataaacaagatgattgtaaggccacctttatcatgcgtgtgtgaagaatctcttgaa
aatgaaggcagtgatcgggaaaagcaaagttttgcaataagaaaaatttatagtgtaatt
gctcccgaagtggtacttacccttaagaaggtatcagagggtgaggttgtgacttcaaca
tccagtgcttgccaattaaaagaagaaatccagtttatagaatgtagaggctatttactc
cttttgagttaa
DBGET
integrated database retrieval system
