Carya illinoinensis (pecan): 122313992
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Entry
122313992 CDS
T08745
Name
(RefSeq) heat stress transcription factor A-1b-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122313992
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122313992
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
APG6_N
TMF_TATA_bd
BRE1
CENP-F_leu_zip
DUF7801
Seadorna_VP6
XhlA
Motif
Other DBs
NCBI-GeneID:
122313992
NCBI-ProteinID:
XP_042985287
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Position
6:complement(6614005..6620364)
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AA seq
499 aa
AA seq
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MADVNDAGSSTTATTDTLPPFLRKLYAMVDDPETDSVVSWSDGNDSFVVWNPHEFAAKLL
PKHFKHKNLASFIRQLNTYGFKKVDSDRYEFANVKFLKGQSHLLKSISRRKPVHVPTEVP
SSSVGACVEVGKFGLEEEVERLERDKNVLMQELVKLRQHQQSTDHQLQNVVQRVQVMEQR
QQQMMSFLAKAMQSPGLFTQFVQQQNESNRNITGGNKKRRLPNQEESVAGESCTNAPEGQ
IIKYQPSMNEAAKTLLWQILKMNGSPRVEPLMNNPDAFLFDDAPFTNTFDQGNSLNRVSG
VTLSEFLPISAELYMPAEPKFPIRSPSTANSDIQSSSYAMPDHAIKAQFPNLDVYNSQEE
TVLPNFTELQGIMPKSTAEIPDMNLVGSETGNASYVDPMSLLDGSMPIKTGTFYPQNDVG
TLLDEIPVLPGINDTFWEHFLTATPVTEDVDEINSSSLDGDVTMDHGLQMGKKNGLDEIQ
HMNRLTEQMGLLASESRMG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgttaatgatgccggatcttcgacgacggcgacgacggatacattgccgccg
tttctgaggaagctttacgccatggtggacgacccggagaccgactcggtggtttcctgg
agcgacggcaacgacagctttgtggtctggaacccgcatgagttcgctgccaagcttctg
cccaagcacttcaagcacaagaacttggccagcttcatccggcagttgaacacttacggt
tttaagaaggtggactcagaccgttatgaatttgcaaatgtgaagtttctaaaaggtcaa
tcgcaccttctgaagagtattagtcggaggaaaccggttcatgtaccaactgaagtgccg
agctcctcagttggggcatgtgttgaggtagggaaatttgggctcgaggaagaggttgaa
agactcgaaagggacaagaatgttcttatgcaggaacttgttaaattgaggcagcaccag
caatcaactgatcatcagttgcagaatgtggtgcaacgtgtgcaggtaatggagcagaga
cagcaacaaatgatgtcttttctagcaaaggctatgcagagtcctggcttgtttacccag
tttgtacagcagcagaatgaaagcaataggaacattactggagggaataaaaaaagaaga
ctccccaatcaagaagaaagtgtagctggtgagagttgcaccaatgctcccgagggacag
attatcaagtaccagccttcaatgaatgaggcagctaaaaccttgctgtggcagattttg
aagatgaatggatctcctagggtggaaccattgatgaacaacccagatgcatttcttttt
gatgatgctccttttaccaatacgttcgaccagggaaattccttgaatcgagtttctgga
gtgaccctttctgagtttctgcctatttctgcagagttgtatatgccagcagaacccaaa
tttcccattcgttctccatccaccgcaaattcagatattcaatcttcctcttatgcaatg
cctgatcatgctataaaagctcaattcccaaaccttgatgtttataattctcaagaagag
actgttttgcccaactttactgaactgcaggggatcatgcccaaaagcactgcagagatc
cctgatatgaaccttgtggggtctgagactgggaatgcaagttatgtggatccaatgtct
cttttggatgggtcaatgcccataaagactggtacattctatccacaaaatgatgtgggg
accttgcttgatgagatccctgtacttccggggattaacgatactttctgggaacatttt
cttacagcgaccccagtcactgaggatgtagatgaaattaattcgagttcactggatggt
gatgtgaccatggatcatgggttacagatgggaaagaaaaatgggttggacgagattcaa
catatgaatcgtcttactgagcagatggggcttcttgcatcggaaagcagaatggggtga
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