Carya illinoinensis (pecan): 122314066
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Entry
122314066 CDS
T08745
Name
(RefSeq) uracil-DNA glycosylase, mitochondrial isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122314066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122314066
Enzymes [BR:
cill01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
122314066
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122314066
Prokaryotic type
122314066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
LED_rpt
Motif
Other DBs
NCBI-GeneID:
122314066
NCBI-ProteinID:
XP_042985384
LinkDB
All DBs
Position
6:complement(18034050..18038724)
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AA seq
330 aa
AA seq
DB search
MASGSSRTLMDFFKPAAAAKRIKLSSSSPDSAVCKSVTAHCHSESESHIDHSSEDDTTLI
NGHQKARMEFNRLLAKAKLNLKICSQKVYKAKAGEGDGDGDYLKLAELLVEETWLEALPG
ELQKPYFLNLCRFLETEMCSGIRVPIYPPRHLIFNALNSTPFDTVKAVVLGQDPYHGPGQ
AMGLSFSVPEGMKLPSSLLNIFKELHQDLGCSVPSHGNLQKWAVQGVLLLNAVLTVRKHQ
ANSHSKKGWEQFTDAVIKTISQKKQGVIFLLWGNSAQEKSRLIDETKHHILKAAHPSGLS
ANRGFFGCRHFSRTNKLLEQMGVTSIDWQL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgggttcgtccagaaccctaatggatttcttcaaaccagcagcagctgctaag
cgcatcaaactttcatcctcatcacctgattcagcagtctgtaaatcagtcactgcgcat
tgccactccgagtccgagtctcacatcgaccacagctccgaagacgataccaccctaatc
aatggccaccaaaaagcccgcatggaattcaacagactgctagccaaagcaaagcttaat
ctcaaaatctgttcccagaaagtctacaaggccaaagcaggtgaaggtgacggtgatggt
gattatttgaaattggcggaactgttggtggaggagacgtggttggaagctctgccgggg
gaacttcagaagccctatttcctgaacctctgcaggtttctggaaaccgagatgtgctct
ggcatccgtgtgcccatatacccgcctcgccacttgatttttaatgctctcaactctacc
ccttttgatactgtcaaggctgttgttcttggacaggatccttatcatggacccggtcaa
gcaatgggcctttcattctctgttcccgaagggatgaagctcccttccagcttactcaat
atttttaaggaactgcaccaggacctcggctgttcggtcccgtcgcatgggaatctacag
aaatgggctgtacagggtgttctactgctcaatgctgttctcaccgttaggaaacaccag
gctaattctcattcaaagaaaggatgggagcaatttactgatgccgttattaaaacaatt
tcacaaaagaagcaaggagtcatttttctcctttgggggaactctgctcaagagaaatcc
aggttgattgatgagactaagcatcacattctcaaagcagcacacccttctggtttgtca
gcaaacagaggcttttttggatgcaggcatttttctcgcacaaacaagcttttggagcaa
atgggtgttacctctatagattggcaactttga
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