Carya illinoinensis (pecan): 122314101
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Entry
122314101 CDS
T08745
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00040
Pentose and glucuronate interconversions
cill01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
122314101
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
122314101
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
122314101
NCBI-ProteinID:
XP_042985439
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Position
6:26843578..26845899
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AA seq
441 aa
AA seq
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MERVNKNVLLLVFLVSFVVIIPTLHADDNFVPLDGYWQQRAAEAQKASLAAYDPHPEEIT
RDLNFHVNKVLSGSNNTRRNLKKNTGPCTATNPIDRCWRCDPNWAQNRKKLTDCVLGFGR
NTVGGKYGPYYVVTDSSDDDLVDPKPGTLRHAVTQDGPLWIIFARSMIIRLHEELIMTSN
KTIDARGANVRIAYGAGITIQFVQNVIIHNIHIHNIYAGSGGLIIDSMNHVGIRTPSDGD
GISIFGSSNVWVDHVSMSQCKDGLIDAIMGSTAITISNCHFTNHNEVMLFGASDSFSGDE
IMQITVAFNHFGRGLVQRMPRCRWGFVHVVNNDYTHWLMYAIGGSSHPTIISQGNRFIAP
PNLFSKEVTKRDYASESEWSSWVWRSEGDLMMNGAFFVQSGPEFDKKPFSRFDVIKSRPG
TYVKRLTRFSGTLRCKPGVPC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggaaagagttaacaaaaatgtcttgctcctagtgtttttggtgtcatttgttgtgatt
atcccgacccttcatgctgatgacaatttcgttccattggatggttactggcagcaaaga
gctgcggaggcccaaaaggcttcccttgcggcctatgatcctcatcctgaggaaatcact
agggacttgaactttcatgtcaacaaggttctgtctgggagcaacaacacgagaagaaac
ctaaagaagaacacgggtccatgcacggccaccaaccccattgatagatgctggaggtgt
gacccaaactgggcccaaaatcgcaagaagctaactgactgcgtgctcggctttggccgc
aacactgttggtggaaaatatggtccttactatgttgtgactgattcctcggacgacgac
ctagtggatcccaagcccggaaccctccgccatgctgttacccaggatgggcccctctgg
attatctttgcacgcagcatgatcattaggctccatgaggagttgatcatgaccagcaac
aaaaccattgatgctaggggagccaatgttcgcatcgcttatggtgccggcatcaccatc
cagttcgtgcaaaacgtgatcatccataacatccatatccataacatttacgccggtagt
ggtggactcatcatagattctatgaaccatgtcggtatcaggactcctagtgatggcgat
ggtatctccatctttggctcatccaacgtctgggttgaccatgtttccatgtcccaatgc
aaagatggtctcattgatgctattatgggatcaactgctataaccatctccaactgccat
tttaccaaccacaatgaggtgatgttatttggtgcaagcgatagcttttctggtgacgag
ataatgcaaatcacagttgcctttaatcactttggaaggggattggtgcagcgaatgcca
aggtgccgatgggggtttgtccatgttgttaacaatgattatactcattggcttatgtat
gccattggtggtagtagccatcctaccattatcagtcagggtaacagattcattgctcct
ccaaacctgttttctaaagaggtgaccaagcgagactatgcaagtgagagtgagtggagc
agctgggtatggaggtccgagggagatttgatgatgaatggtgcgttctttgttcaatca
gggcctgagttcgacaaaaaaccattctcaaggtttgatgtgatcaaatcgagacctgga
acctatgtgaaaagactcacacgcttctcgggcacacttcgctgcaaaccaggggtaccc
tgttaa
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