Carya illinoinensis (pecan): 122314113
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Entry
122314113 CDS
T08745
Name
(RefSeq) protein GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
cill03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122314113
03015 mRNA surveillance pathway
122314113
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122314113
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122314113
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
122314113
NCBI-ProteinID:
XP_042985456
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Position
6:22453119..22464261
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AA seq
643 aa
AA seq
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MGAVKLELHCPQSVDGIALDPEPDWNFDALLSELNSLEMKLNTSAKVPARFTKSRLRDFS
NEKSDDKCPRPFVMHVFEDEMEDSESDGEDNRRLVPAKRFKCEKHYLSDDSDDELALEFQ
SYLMDEVGLVESALCELTYEYQVDTKEKIRNKISALETDLMGETEKSASALTRVEKYREV
RREIDKKLDTQYQRKIAEALDNHLTAVQRDHELRSQIEERKIRSDAAYEEAKRKEKALQE
EKIRQEKARAESEARLRAEEAKRAALEVERREAKEAAEREANETAAKVAAGVAQEAAAGC
QLDANSGISNESKGFPSDESKNPQSDGNVLRAAESALLLEQGRLQKLQQIEESNQALRLT
HNKDFSSYERHIARLIRQISGTKEIVREKSHEIVKIFNDPLCPQPISIAAFAKKVVSRCE
SPDNDAFACGYVIVLVISQVPHAMDLLLAELHRACTYTVPKHIIYSKSAFESKEAYYKAI
GYRETEGKIESIGDYLRRLESYMKLYGAIIQTEVQGVRNIHGLKEGWAWIARFLNTMPAN
RYTAVALNAFLQMAGFALFRKYKSQFMKVLSIISNNFLEALKAREESGLRATIVEIQAYM
EDKKFLKEPEGKALQGSLLSSVMVPEPDYYNSYSRQQPNKYFY
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgggagctgtaaagttggaacttcattgtccccaaagtgttgatggaatcgccttggac
cctgagccggattggaactttgatgctttattatcagagcttaattcattggaaatgaag
ctcaatacctctgcaaaggttcctgcacgtttcaccaaatcaagactgcgagacttctca
aatgagaagagtgatgataaatgtcctaggccttttgtaatgcatgtgttcgaggatgag
atggaggattctgaaagtgatggtgaggacaatcgaagattagtgcctgcgaaacggttc
aaatgtgaaaaacattatttgagtgatgattctgatgatgagttggctcttgagttccag
tcctacttgatggatgaagtgggattggtagaaagtgctttatgtgaactaacatatgaa
tatcaagttgatactaaggagaagattaggaacaaaatttctgcactagagacagatttg
atgggtgaaactgaaaagtctgcttctgcactcactcgagttgagaaatatagagaagta
agacgggaaatcgataagaaacttgacactcaatatcagcgcaagatcgcagaagcactt
gataatcatttgactgctgttcagcgggaccatgaattgagatcacaaatagaagaaaga
aaaataagaagtgatgcagcttatgaagaggccaaaagaaaggaaaaggctctccaagaa
gaaaaaatacgccaagaaaaagctagagcagaatctgaggcaagacttagagctgaggaa
gcaaaaagagctgctttagaagttgagagaagagaggcaaaagaagctgctgaaagggaa
gctaatgaaacagcagcaaaggttgctgctggggtggcacaagaagcagctgcaggatgc
caactggatgccaattcaggaatttcaaatgaatccaaaggatttccatctgatgaatca
aaaaacccacaatcagatggtaacgttctcagggctgctgaaagtgctcttcttttagag
caggggagactacaaaaacttcagcagatagaggaaagtaaccaggctttgaggttaact
cacaataaggatttcagcagctatgaaagacatattgctaggttgataagacaaataagt
gggacaaaagagatcgtcagagaaaagtcacatgaaattgtaaagattttcaatgatcct
ctttgccctcagcccatcagcattgcagcatttgcaaagaaggtagtctctcgttgtgaa
agcccagataatgatgcttttgcatgtggctatgtcatcgttcttgttatttcacaggtt
ccacatgcaatggatctccttctagccgagttacacagagcctgcacttacactgttcca
aagcacataatttactcaaagtcggcatttgaatccaaagaagcttattacaaggccatc
ggataccgggaaacagaaggaaagattgagagcattggggactatttgagacggttagag
tcctacatgaaactgtatggggccatcattcagacagaagtgcagggtgtccggaacata
catggcctgaaagaaggttgggcatggattgcacggttcttaaacactatgcctgccaat
agatatactgccgttgcattgaatgcattcctgcaaatggcagggtttgctctcttcaga
aaatataaatctcagttcatgaaggtgctgagcatcatctctaacaattttctggaagca
ctgaaagcacgtgaagagtcggggttaagagcgaccattgttgagattcaagcttacatg
gaagataagaagttcctaaaggagccagagggaaaagccctgcagggttcattgctatca
agtgttatggtgccggagccagattactacaactcgtattctcgccagcaaccaaataaa
tatttctactga
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