KEGG   Carya illinoinensis (pecan): 122314202
Entry
122314202         CDS       T08745                                 
Name
(RefSeq) THO complex subunit 7A-like
  KO
K13176  THO complex subunit 7
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03013  Nucleocytoplasmic transport
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122314202
  09122 Translation
   03013 Nucleocytoplasmic transport
    122314202
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cill03019]
    122314202
   03041 Spliceosome [BR:cill03041]
    122314202
Messenger RNA biogenesis [BR:cill03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     122314202
Spliceosome [BR:cill03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    122314202
SSDB
Motif
Pfam: THOC7 Viral_DNA_bp SPATA1_C ECH_2 APG6_N
Other DBs
NCBI-GeneID: 122314202
NCBI-ProteinID: XP_042985559
LinkDB
Position
6:6650400..6653198
AA seq 241 aa
MLSKGRKVSSRGEAVTANYAFGPHDEDIIIKHRLLTRTTTTRGEPPLKKLQKKFTSFVLE
IEKDADNNGDCEKLAKAFLQELSTFEIPLLKSKAVVDANIREKENFNELKDEINRQIVQA
QADIEDLKKQLEESKIERQHKEECEAIRKLIATQPPRSETQKIISQLEKEIAALDAENTA
GSRLLELRKKQFALLLHVVDELQNTIEEEQKSLVEEMRIATEEQKNGIEDASGGSDAMAV
D
NT seq 726 nt   +upstreamnt  +downstreamnt
atgttatcaaaaggaaggaaagtttccagcaggggagaagcagtaacagcaaactatgct
tttggcccgcatgacgaggacataattataaaacacaggcttctaacccgcaccacaacc
acaaggggtgaacctccgttgaagaaacttcagaagaagttcacctcttttgtccttgag
attgagaaggatgcagataataatggagactgtgagaaacttgccaaagctttcttacag
gagctttcaacatttgaaattccactcctcaagagcaaagcggttgttgatgcgaacata
agagagaaggagaacttcaacgagttgaaagatgagataaacaggcagattgtccaagca
caggctgacattgaagatcttaagaagcagcttgaagagagtaagattgagaggcagcac
aaagaggagtgtgaggcaatcaggaaactgattgccacgcagccacctagatcagagaca
cagaagattatatcacaactagagaaagaaattgcagctttggatgccgagaacacagct
ggttcaaggttgctggagcttcgcaagaaacagtttgctcttttattgcacgtggttgat
gagttgcagaataccatagaggaagagcagaaaagtttggttgaggagatgagaatagcg
actgaagagcagaagaatgggattgaggatgctagcggggggtcagatgcaatggctgtt
gactaa

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