Carya illinoinensis (pecan): 122314252
Help
Entry
122314252 CDS
T08745
Name
(RefSeq) serine/arginine-rich splicing factor SC35-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122314252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122314252
Spliceosome [BR:
cill03041
]
Common components
Common spliceosomal components
SR proteins
122314252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Nup35_RRM_2
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
122314252
NCBI-ProteinID:
XP_042985663
LinkDB
All DBs
Position
6:complement(34893468..34897777)
Genome browser
AA seq
249 aa
AA seq
DB search
MSHFGRTGPPDITDTYSLLVLNVTFRTTADDLFPYFDKYGKVVDIFIPRNRRTGDSRGFA
FVRYKYADEAQKAVDRLDGKVIDGREIAVQFAKYGPNAEKIHKGRIIELSSRSRSRSPRR
RYRDDYRDRDYRDRDYRRGRGRSLDRYDRDKYGRERDYRRRSRSRSVSPDYHRARGRGRY
YDEHRSRSPSMDSASPIRRSPNLHRSPSPQRSPSPRGRSPDRHSREGRSPTPLSISSRGR
SADSRSQSP
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacttcggaaggacaggccctccggacatcaccgatacctattctctcctcgtt
ctcaatgtcaccttccgtacgactgcggatgatctattcccttattttgataaatatggc
aaggtcgtggatatcttcatccctagaaatcgaaggaccggtgactcaaggggctttgct
tttgtgcggtataagtatgctgatgaggcacagaaagcagtggataggctagatggtaaa
gttatagatggtcgagagatagctgttcagtttgcaaaatatgggccaaatgcggagaaa
attcacaaagggagaattattgaattgtcctcaaggtcaagaagccgcagtcctcgcaga
aggtaccgagatgactacagagatcgggactacagagatcgggattacagaagagggcgc
ggtagaagtcttgataggtatgatcgtgataagtatgggagggaaagggattatcgtcgc
cgaagcaggagtcgcagtgttagtcctgactaccatagggctcggggaagaggccgttat
tatgatgagcatcgaagccgaagtccttcaatggatagtgcctcccccattcggcgtagt
cccaatcttcacaggagtccttcaccacaaaggtctccatctcctaggggtcgaagtcct
gataggcacagccgtgagggaagatctccaactcctctcagtatttcatccaggggtcgg
tctgcagattctcgaagccaatccccttga
DBGET
integrated database retrieval system
