Carya illinoinensis (pecan): 122314270
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Entry
122314270 CDS
T08745
Name
(RefSeq) transcription factor TCP7-like
KO
K16221
transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
122314270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122314270
Transcription factors [BR:
cill03000
]
Eukaryotic type
Other transcription factors
TCP
122314270
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GFIT
Motif
Pfam:
TCP
Motif
Other DBs
NCBI-GeneID:
122314270
NCBI-ProteinID:
XP_042985688
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Position
6:21038964..21041009
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AA seq
268 aa
AA seq
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MSDSDGANNGVSNGAIIDPQRQQPVLNGSLVAVKKPPAKDRHSKVDGRGRRIRMPIICAA
RVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSTLAVSVRAGGCGSSTSL
SSSSTSTSLSHCLDHKPLLGSTPFILGKRVRADEDADGKDESPCVTVANSMGSVLGPTAT
GGFWALPTRTDFWSFATAAAAAAPQAEMVQVQQQQQPSLFVTHHHQHQQPMGEASAARVG
NYIPGHLNLLASLSRGPGSSDRREDDPR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgattccgacggagccaataatggtgtttccaacggcgccattatagacccccag
aggcagcaaccggttctcaatggttctctcgtcgccgtcaagaagccccccgccaaggac
cgtcacagcaaggtcgacggccgcggcaggcgtatccgcatgcccatcatctgcgccgca
cgggtcttccaactcactcgcgagctcggccacaagtccgatggccagaccatcgagtgg
ctcctccgccaagccgagccctccatcatagccgccactggaactggcaccacccccgca
agtttctccaccctggccgtctccgtgcgtgccggcggatgcggctccagtacctccctc
tcttcgtcttcaacttccacctccctctcccactgtctggaccacaagcccttgctgggc
tccacccccttcatcttaggaaaacgcgtccgtgccgacgaggatgccgacggcaaggat
gagagcccctgcgtcaccgtggctaattcaatgggatccgtactgggacccaccgccact
ggtggcttctgggcgttgccgaccagaaccgacttctggagcttcgctactgcggctgcc
gccgctgctccgcaggccgagatggtgcaggtacagcagcagcaacaaccatcgctgttc
gtcacacatcatcatcagcaccaacagccaatgggcgaggcgtcggctgcccgagtggga
aattatattccggggcatctgaatttgttggcttcgttgtcgaggggaccggggagttcg
gatcggagagaggacgaccctcgctga
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