Carya illinoinensis (pecan): 122314329
Help
Entry
122314329 CDS
T08745
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122314329
Spliceosome [BR:
cill03041
]
Common components
Common spliceosomal components
General mRNP proteins
122314329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
122314329
NCBI-ProteinID:
XP_042985768
LinkDB
All DBs
Position
6:31791580..31802996
Genome browser
AA seq
600 aa
AA seq
DB search
MDFDAYDYLEKTVENFEPQKDKEGAVNGGGETEKYVDKDHSGSSKHRNEERDDYAERSSK
RSRSRDELHDLDKHRERGSSHQRLRSRDGERDRHRSSWEHKDKERDKDRDRDREERNGKE
RNKDRDRERDRDRDRDRRERGHESEWEKERSHRSKSRSDRHPSERDERERSRDKEYKERE
RERELREHDRESRRYKEKKEELTEPEADPERDQRTVFAYQICLKANERDVYEFFSRAGKV
RDVRLIMDRNTRRSKGVGYIEFYDAMSVPMAIALSGQPLLGLPVMVKPSEAEKNLVQSTT
SVANASGGHIGPYSGGARRLYVGNLHFNMTEADLRQVFEAFGQVELVQLPLDETGHCKGF
GFVQFARLEDSRNALSLNQQLEIAGRLIKVSAVTDQTGLQDIGANSGDFDDDEGGGLSLN
ARSRALLMQKLDRGGAATSTAGSVGNPAVNSTGLTLPTAPILGAAPVVSPVVAPLASMPA
LAGLGVGLQVPTAAVPIADTIGVPSECLLLKDMFDPKIEMEPDFDLDIKEDVQEECSKFG
TLEHIYVEKNSAGFVYLRFENVQAAVAAQRALHGRWFAGKMITATFMVPQAYEAKFPDSR
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgcctatgattatttggagaaaactgttgaaaatttcgagccccaaaaa
gacaaagaaggtgctgtcaacggtggtggtgaaactgagaagtatgtagacaaagatcat
agtggaagttcgaaacataggaatgaggagagggatgattatgcggaacgaagctccaag
cgctcaagatctagagatgagttgcatgatcttgataaacatagagagaggggctcatct
caccaaagattgcggtctagagatggggaaagagatcggcacaggagtagttgggaacat
aaggataaagagagggacaaggatagagatagggatagggaggagaggaatggaaaggag
agaaacaaggatagagatagagagcgggatcgcgatcgagatagagacaggagagaacgt
ggccatgagagtgagtgggagaaagagcggtcccatcgaagcaagagtcgatcggatagg
catccaagtgagcgtgatgaaagagagaggagtcgtgacaaggagtacaaggaaagggaa
agggaaagagagttaagggaacacgacagagaaagtagacgatataaagaaaaaaaggag
gaattgactgaaccagaggcagatcccgaacgggatcagaggactgtatttgcttaccag
atttgtttgaaggctaatgaaagagatgtgtatgaattcttctcaagagctggcaaggtg
cgagatgtacgccttataatggatcgtaatacaaggcgttccaagggagttgggtatatt
gagttctatgatgcaatgtctgtccctatggcaatagcactctctggtcagcctcttctt
ggcctaccagttatggtgaagccatcggaagctgaaaagaatctggtccagtcaactaca
tcagtggccaatgcatcaggggggcatataggcccttattcaggaggtgctagaaggctt
tatgttggcaatctgcatttcaacatgaccgaagctgatcttcgtcaggtttttgaagca
tttggtcaagtagagctggtgcagttgcctcttgatgaaactggacattgcaagggtttt
ggctttgtccagtttgcacgccttgaggactctaggaatgctttgagtctgaatcaacaa
ttggagattgcaggccggcttatcaaggtttcagctgttaccgaccaaactggactgcaa
gatattggagccaattctggtgattttgatgatgatgaaggaggtggcttgtctctgaat
gcgcgttctcgagcacttctcatgcagaagttggaccgtggtggcgctgcaactagtact
gctggttcagttggcaatcctgctgtcaatagcactggccttactttaccaacagctcct
atcctaggagctgctcccgtggtatctccagttgttgctccccttgcttcaatgcctgct
cttgctggacttggtgttggtcttcaagttcccactgctgctgtgccaatagctgataca
attggtgttccaagcgaatgcttattattgaaagatatgtttgatccgaaaattgagatg
gaaccagatttcgatctggatatcaaagaagatgttcaagaagaatgttcaaagttcgga
actttggaacacatatatgtagaaaagaacagtgccggttttgtatacttgcgatttgag
aatgttcaagctgcagttgccgcacagcgtgctctccatggaagatggtttgctggaaag
atgattactgcaacatttatggtgccacaagcatacgaggctaagttccccgacagcaga
tag
DBGET
integrated database retrieval system
