Carya illinoinensis (pecan): 122314403
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Entry
122314403 CDS
T08745
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
122314403
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cill04040
]
122314403
Ion channels [BR:
cill04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
122314403
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Motif
Pfam:
Ion_trans
S1FA
Ac76
Motif
Other DBs
NCBI-GeneID:
122314403
NCBI-ProteinID:
XP_042985894
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Position
6:1907619..1915102
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AA seq
386 aa
AA seq
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MDTERQGPKTTLKEWCKLYLFHWNVAFLVVCVVAIAVDPIFFYLPVIKEATKCIAIDTTL
KIIGICVRSFLDLIAIGDLVARKMKTREYYVISILSILPVPQVIVPIIFSDMRDYKSRHG
RKVLNAVVLLQYVPRLFRIYRLWKIVKGSINETLKGSTNEVNAEGNRNMKPIIVMKAGFN
LLLYLVASNVLGAFWYFVSIQRETTCWQLACKNDIECSKTSPSFNCGDGFGNYTFLNDSC
SVETPKTTLFDFGIFQEARQSGILASKDFFQKTMYCFWWGLRNLSSLGQNLETSSDYWEN
CFTVLISIFGLLLFLFFIGNLQVYMQWEAEKEMKDIYGDQNDEISKQISKEHDEISKLLE
VIYKEHDQISKLLEIRPLPPVAPQVI
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggatactgagaggcaaggtcccaagacgacattaaaagaatggtgcaaactgtacctc
ttccattggaatgtggcgtttttagtggtctgcgtagttgcaatagcagtggaccctatc
ttcttttatcttcctgttatcaaggaggctaccaaatgcattgctatagataccactttg
aaaatcattggtatttgtgtgcgatcgttcctggatttgattgctattggggatctggtt
gcaagaaaaatgaagactcgagagtactacgtaattagcattctcagcattcttccagtt
ccgcaggttatagtgccaattatattttcagacatgagagattataaatcccggcacgga
aggaaagtcttaaatgcagttgttcttttgcaatatgtgccaagacttttccgtatctac
agattgtggaaaatagtcaaaggtagtatcaatgaaacactcaaaggtagtaccaatgaa
gtgaatgcagaaggcaacaggaatatgaaaccaattatagtgatgaaagctggattcaac
cttttactgtatctcgttgccagtaacgtactgggtgctttttggtacttcgtctccatt
caacgagagaccacgtgctggcagttggcctgcaagaatgatattgaatgtagcaagact
agtccttcttttaactgtggtgatggttttggaaattacacgtttttaaatgattcttgc
tctgtagaaacaccaaaaaccactctctttgattttggaatattccaagaagcccgtcaa
tctggtatattggcgtccaaggactttttccagaagaccatgtattgtttttggtggggc
ctgcgaaatttgagttcacttggtcaaaaccttgaaacaagttctgattactgggaaaac
tgcttcacagttttaatctcgatctttggcctgcttctgtttttattctttatcggaaat
ttgcaggtgtacatgcagtgggaggcagaaaaagaaatgaaggatatatatggggatcag
aatgatgagatatctaagcagatatctaaagagcatgatgagatatccaagctgttggag
gtgatatataaagagcatgatcagatatctaagctgttggagataaggccgctgccgccg
gtagccccccaagtaatttag
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