Carya illinoinensis (pecan): 122314682
Help
Entry
122314682 CDS
T08745
Name
(RefSeq) protein PIR
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122314682
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122314682
Factors involved in mRNA localization
Other mRNA localization factors
122314682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
WASH-4_N
Motif
Other DBs
NCBI-GeneID:
122314682
NCBI-ProteinID:
XP_042986123
LinkDB
All DBs
Position
7:complement(15859951..15926679)
Genome browser
AA seq
1284 aa
AA seq
DB search
MAVPVEEAIAALSTFSLEDEQPDVQGPGVWVSTERGATESPIEYSDVSAYRLSLSEDTKA
LNQLNALIQEGKEMASVLYTYRSCVKALPQLPDSMKQSQADLYLETYQVLDLEMSRLREI
QRWQASAASKLAADMQRFSRPERRINGPTITHLWSMLKLLDVLVQLDHLKNAKASIPNDF
SWYKRTFTQVSIQWQDTDSMREELDDLQIFLSTRWAILMNLHVEMFRVNNVEDILQVLIV
FAVESLELDFTLLFPERHILLRVLPVLVVLATSSEKDSESLYKRVKINRLINIFKNDPVI
PAFPDLHLSPAAILKELSMYFQKFSAQTRLLGLPAPHELPPREAQDYQRQYLIINHIGAI
RAEHDDFALRFASSLNQLLLLKSTDSADIEWSKEVKGSMYDVIVEGFQLLSRWNARIWEQ
CAWKFSRPCKDPVPLELHETSTSFSDYEKVVRYNYGAEERKALVELVSYIKSIGSMMQRF
DTLVADALWETIHAEVQDFVQNTLATMLRTTFRKKKDLSRILSDMRTLSADWMANTSKSE
SELQSLQHGGDESKGNFFYPRPVAPTAAQIHCLQFLIYEVVSGGNLRKPGGLFGNTGSEI
PVNDLKQLESFFYKLSFFLHILDYTATVATLTDLGYLWFREFYLESSRVIQFPIECSLPW
MLVEYVLESRNAGLLESVLMPFDIYNDSAQQALVVLKQRFLYDEIEAEVDHCFDIFISKL
CEAIFTYYKSWAASELLDPSFVFALDNGEKYSVQPMRFTALLKITRVKLLGRSIDLRCLI
AEWMNKVFRENLEFLFDRFESQDLCAIVELEKLLDILKHTHELLSKDLSIDSFSLMLNEM
QENISLVSFSSRLASQIWLEMQSDFLPNFILCNTTQRFIRSSKVPLVSVQKPSVPHAKAN
FYCGTQDLNSAHQSFARLHSGFFGMPHMFSMARLLGSRSLPWLIRALLDHISNKIATIEP
MITGLQEALPKSIGLLPFDGGVTGCMRLVKENLNWGKKSELKAEVLRGIKEIGSVIYWMG
LLDIVLREVDTTHFMQTAPWLGFFPGADGQILHNEDGGSPVVNLFASATAAIASDPNCPN
PMSFHTISKQAEAADLLYKANMNSGSVLEYTLAFTSAALDKYCSKWSTGPKTGFIDITTS
KDFYRIYSGLQIGYLEETTQALSNNNEVLGDSVAWGACTVVYLLGQQLHFELFDFSYQVL
NVAEVEAASITQTHKVHFAQGWEALLEAMKKARRLNNHVFSMLKARCPLEDKTACAIKQS
GAPLHRIKFENTVSAFETLPQKGA
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccctgttgaggaagccatcgcagctctttctacattctcgctagaggatgag
caaccagatgtacaaggaccaggagtttgggtgtcaactgagagaggtgcaaccgagagt
ccaatcgagtacagtgacgtttcagcataccgcctgtcactgtcagaggatacaaaggcg
ctaaaccagctgaatgcccttatccaagaggggaaggagatggcatccgtgctttatacc
tatcgcagttgtgtcaaggcgcttcctcagcttcctgattctatgaagcaaagtcaagct
gatttgtatctagaaacataccaagttttggacttggagatgagtcgtctccgtgaaatt
cagcgctggcaagcatcagctgcatcgaaactagctgctgatatgcagcgcttctctaga
cctgaacggcgcataaatggcccgacaatcactcatctctggtccatgttgaagttacta
gatgtcttggtgcaactcgatcatctaaaaaatgctaaagccagcatacctaatgatttc
tcttggtataagaggacattcacacaagtcagtattcaatggcaagacactgattcaatg
agggaggaattagatgatttgcagattttcttaagcacgaggtgggctatcttaatgaat
ttgcacgttgagatgtttcgtgtgaacaatgttgaagacattcttcaagttctcatagtc
tttgcggttgagtcgttagagttggatttcacacttctgtttcctgagcgacacattctt
ctacgtgttttacctgttcttgttgtcttagcaacatcctcggagaaagacagcgagtct
ctatacaagagggtgaaaattaacagactgataaatatatttaagaacgatccagtcatt
cctgcatttccagatcttcatctttctcctgctgcaatcttgaaagagctgtcgatgtac
tttcaaaaattttccgcccaaactcgtcttctcggtcttccagcacctcatgagcttcca
ccccgtgaggcacaagattatcagagacagtatctcatcattaatcacattggagcaatc
cgtgccgagcatgatgattttgcacttcgttttgcttcatcgttgaatcagctattgttg
ttaaagtcaacagatagtgctgatattgagtggagcaaagaagttaagggaagcatgtat
gatgtaattgttgaaggttttcagcttttaagcagatggaatgcacgcatttgggaacaa
tgtgcgtggaaattttctcgcccatgcaaggatccagttcctttggaattacatgagact
tcaacgtcattttctgactatgaaaaggttgtacggtataattatggtgcagaggaaagg
aaagcacttgttgaacttgttagctacataaagagcattggatccatgatgcagcggttt
gatacattggtagctgatgcattatgggaaacaatacatgctgaggtccaagattttgtc
caaaacacattggcaactatgttgcgaactaccttccgaaagaagaaggacctttcaagg
attctttccgatatgaggaccctttctgcagattggatggcaaatacaagcaagtcagaa
tcagagttacaatctttacagcatggaggcgatgaaagcaaagggaacttcttttatcca
aggccagttgcaccaacagctgctcagatacattgtttgcagttcctgatatatgaggtg
gtctctggaggtaaccttaggaagccagggggtctctttgggaatactggatctgagatt
cctgtcaatgatttgaaacagttggaatcctttttttataagctcagcttctttctgcat
attttggactacacagctactgttgcaactttgacggatcttgggtacttgtggttcaga
gagttttatttagagtcttctcgtgttattcagtttcccattgaatgctctcttccctgg
atgctggtggagtatgtgcttgagtcacggaatgctggtcttcttgagagtgttttgatg
ccatttgacatctataatgattccgctcagcaagcactggttgtattgaagcaacgcttc
ctctatgatgaaattgaggctgaggtggatcattgtttcgatatatttatttcaaaactt
tgtgaggctattttcacatactacaagagttgggcagcaagtgagttacttgatccatca
tttgtcttcgcattggacaatggagaaaaatattctgtccagcctatgagattcactgcc
cttctaaagattacaagagtgaagttactggggaggagcattgatttaagatgtctgatt
gctgagtggatgaacaaagttttccgggagaatcttgagttcctttttgatcgttttgag
tctcaggatctatgtgccatagtggaattagagaagctgcttgatatcttaaaacacacc
cacgaattgctatccaaagatctttcaatagactcattcagtcttatgttgaatgagatg
caagaaaatatctctctcgtgtcattttctagtcgacttgcttctcagatctggttggag
atgcaaagtgactttttaccaaattttatcctttgcaatactactcagcgttttatccga
tcatcaaaggttcctctagtttctgttcagaagccatcagttccccatgccaaggctaac
ttctattgtggcacacaagatttgaactctgctcatcaaagttttgcacgactgcacagt
ggattctttggaatgcctcacatgttttccatggcaagactactgggatcgagatcattg
ccttggctgattcgagcacttctagatcatatatccaataagatagctacgattgaacca
atgattacaggattgcaagaagcactgccaaaatctattggattgcttccttttgatgga
ggtgtgacaggttgtatgaggcttgtgaaagaaaatcttaattgggggaagaaatcagaa
ctcaaagcagaagttcttcgtgggataaaggagatcggaagtgtcatatattggatggga
cttcttgatattgtgttgagagaagtggataccacacatttcatgcaaacggcaccttgg
ttgggcttttttcctggtgcagatgggcaaatattgcataatgaagatggaggcagccct
gttgtcaacctctttgcatctgccactgctgcaattgcatcagatcctaactgtccaaat
ccaatgtctttccacaccatatcaaaacaggcagaagctgcagatctcttgtacaaggct
aacatgaattctggaagcgtgctggagtatacccttgctttcacaagtgcagcactggat
aaatattgtagcaagtggagtactggtccaaagacagggtttatcgacattacaacatca
aaggatttctaccgtatatatagcggccttcaaattggatatcttgaagagactactcag
gcattatcaaacaataatgaagtgctgggtgattcggttgcctggggtgcttgcaccgtg
gtgtacttgcttgggcaacagctgcattttgagctttttgatttttcatatcaggtcctc
aatgttgcagaagtggaggctgcatcaataacacagacacataaagttcattttgctcag
gggtgggaagcacttttagaagcaatgaagaaagcaaggagactgaataaccatgtgttc
tccatgctgaaagcacgttgccccctcgaagacaagacagcttgtgctatcaagcaaagt
ggtgcccctctgcataggattaaatttgagaatacagtttctgcatttgaaacgctgcct
cagaaaggagcctga
DBGET
integrated database retrieval system