Carya illinoinensis (pecan): 122314722
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Entry
122314722 CDS
T08745
Name
(RefSeq) protein NPGR1
KO
K21843
tetratricopeptide repeat protein 7
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122314722
Membrane trafficking [BR:
cill04131
]
Endocytosis
Others
EFR3-PI4KIII alpha complex and associated proteins
122314722
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_16
TPR_CcmH_CycH
TPR_19
TPR_1
ARM_TT21_C
TPR_17
ANAPC3
TPR_8
TPR_9
TPR_4
TTC7_N
Motif
Other DBs
NCBI-GeneID:
122314722
NCBI-ProteinID:
XP_042986215
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Position
7:complement(37991044..37995707)
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AA seq
713 aa
AA seq
DB search
MLCACSGEQFKLDERPQSPESLATRDFSASGLSSRAGDWDSKFDDAQVDEVESTLKEALS
LNYEEARALLGRLEYQRGNHDAALQVFQGIEVKTLTPRMARAIVESTRPRRPRGKGDNAT
PSVMSMHSVSLLLEAILLKARSLEELGRYIEAAKECKIILDVVESALPTGMPEGIGEDCK
LQEMFHKALELLPVLWTRAGFLDEAIIAYRRVLVKPWNLDPQRLAGVQKDLAATLLYGGI
EASIPPQLKVRDPTTPKNNTEEAILLLLILMRKVALREIKWDTEIMDHLTYAFSITGQFE
LLADHVEQVLPGIYNRTERWYFLALCYSAAGQNETALNLLKKVSSCSEAKPKPHIPSILL
GAKLCSQDPSHAHHGIEFAQKIIDLADQQKEHFVGQAHKLLGVCYGNAARVSVLDSDRIL
FQKESLNSLNHASFIWKEDPEVMYSLGLENALQRNLDVAFDNATMYSDLVAGSSGRGWKL
LALVLSAEQRFSDAETIVDFALDETGMMDQLELLRLKAVLQIAQKQPKQAIETYRILLAL
IQAQGEFRTKNLDQAKYLVSNALVERKLEMTAWQDLASIYTELGSWPDAEICVGKAKSIE
FHSPGSWHTTGILFEAQSLYKEALVSFSVSLSIEPDHVPSIVSTAEVLMKLGSHSLPIAR
SFLMNAVRLEPTNHQAWLNLGLLSKMEGSLQQAADYFQAAYELKSSAPIQSFI
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgtgcttgctcaggtgagcaattcaagttggacgagcggccgcagtcgccagag
tcgctagcgacaagggatttctcggcgagtgggctttcgtccagggccggtgactgggat
tcgaaatttgacgatgcccaggtggatgaagttgaatccactctaaaagaagctctctcc
ttaaactatgaggaagctagggctcttttggggaggctcgagtaccagagagggaatcat
gatgctgccctgcaggtatttcagggtattgaggtaaaaactttaacgccaaggatggct
agggctattgttgagagcactaggccacggagaccacgtggtaaaggtgataatgcaact
cccagtgtgatgtcgatgcattcggtgagcttactccttgaagcaatcttgcttaaagcc
agatcactggaggaacttgggcgatatatagaggctgcaaaggagtgcaaaataattctg
gatgtagttgaatcggcactacctactggaatgcccgagggcattggtgaagactgcaag
ttgcaagagatgtttcacaaagcattggagttgctccccgtcttgtggaccagggcaggg
tttcttgatgaagctatcattgcatatcgccgggttctagtcaagccatggaacttggac
ccccagaggttggctggtgttcaaaaggacttagctgctactttactctatggtggaatt
gaagcaagtattcccccccagttgaaagtacgggatccaaccaccccgaaaaataatact
gaagaggctatccttttgttgttaattctcatgagaaaagtggcacttcgggaaataaaa
tgggatacagaaattatggaccatctaacctatgcattctcaattaccggccagtttgaa
ttgttagcagaccatgtggagcaggtccttccaggtatctataaccgaactgagaggtgg
tactttcttgctctctgttatagtgctgcaggacaaaatgaaacagctctgaacctgtta
aagaaggtttcaagttgttctgaagcaaagcccaagccccacattccttctattttgctg
ggagcaaaattgtgttcccaagatccaagccatgctcaccacgggattgaatttgctcaa
aaaattattgatctggctgatcagcagaaggagcatttcgtgggtcaagcccacaaattg
cttggtgtttgctatggcaatgctgctagagtttctgtcttggactctgatcgaattcta
tttcagaaagagtctttgaactctctaaaccatgctagttttatttggaaggaggatcca
gaagtaatgtatagccttgggctagaaaatgcactgcagaggaatctggatgtagctttt
gacaacgcaacgatgtattctgatttggtggcaggcagctcaggaagaggttggaagctt
ttagctcttgtgctttctgcagagcaacgattctctgatgctgaaaccatagtcgatttt
gctctggatgagactgggatgatggatcagttagaacttcttagattgaaagctgtgctt
cagattgctcaaaaacagcccaagcaagcaatagaaacctacagaatcttgctagctctg
attcaagcacaaggggagtttagaactaagaacttagatcaagcaaagtacctggtttcc
aacgcattagtggaaagaaaattggagatgacagcctggcaggacttggcttccatttat
actgagcttggttcatggcctgatgcagaaatttgtgtgggcaaagccaagtcaattgaa
tttcattctcctgggagctggcatacaacaggcatactgtttgaagcacaatcactgtac
aaggaagcattagtttccttctctgtttccttatcaatagaaccggatcatgttccaagt
attgtttctactgcagaagtgctgatgaaactcggtagccactcgctgccaattgcaaga
agttttttaatgaatgccgtacggttggaacccacaaaccatcaagcatggttgaacctt
ggattgctttcgaaaatggaaggctccttgcaacaagcagcagactattttcaagcagca
tatgagcttaagtcgtcagctcctatccaaagcttcatttga
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