Carya illinoinensis (pecan): 122315084
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Entry
122315084 CDS
T08745
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122315084
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122315084
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Malectin
Y_Y_Y
Motif
Other DBs
NCBI-GeneID:
122315084
NCBI-ProteinID:
XP_042986768
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Position
7:5927165..5933932
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AA seq
679 aa
AA seq
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MENAKYLRRQWGSLVGFLGVILLVYFLLTTDCSEKAPLRRVLANVNGRELKLDTHDRLQV
VVDNGLVQVTLSRPAGDVVGIKYNGIDNLLEGRNERDNRGYWDVVWNEPDGHDGLVGRIA
GTQFTIIKENKDQIELSFTQRWNLSLRGKQIVPLNVERRYIFQRGISGYYSYAIFERLKG
WPEVSFGQIRAVYKLREDKFRYMALSDDKQRIMPTQEDREKGQALAYPEAVRLIDPSNPE
LKGEVDDKYQYSSEGKDNKVQGWISADPPVGFWIITPSNEFRSAGPMKQELTSHVGPTVL
SMFMSTHYAGEELNMKFEDGEPWKKVFGPIFVYLNSVSTKKDLQKLWADAEDQMLREVES
WPYNFIQSEDFPTAGQRGTVIGQLVVRDRYMNEKSLDWAESAYVGLAAPGEAGSWQRETK
GYQFWTQADKEGRFQIKNVRPGDYNLYAWVPGVVGDYKNNTKITIKPGSEVKLGLIVYRP
PRNGPTLWKIGIPDRTAAEFYVPDPKPTLTNKLYNNSEKFRQYGLWDRYGDLYQDQDLIY
TINVSDYRKDWFYAQVTRSTNKRVYEGTTWQIKFKLESVNKNGNYTLQLALASANFAELQ
VRFNDLSAQPAHFSTGLIGKDNAIARHGIHGLYRFYSIKASGNLFQEGNNTIYLTQSRDG
SVFQGVMYDYLRLEGPPQW
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcaaagtacttgagaaggcaatggggttcgctcgttgggttcttaggagtg
attttgctggtttacttcttgctcaccaccgattgttctgagaaggcccccctgaggagg
gttctagcgaacgtcaacggccgtgaactgaagctggacacccacgatcgtctacaggtg
gtggtggataatggactggtgcaagtcactttgtcaagaccagcaggtgatgttgtggga
atcaagtacaatggtatcgataatttacttgagggtcgtaatgaaagagataatcgaggg
tattgggatgttgtttggaatgagccagatggccacgacggtctcgttgggagaatagca
ggaacgcagtttaccattataaaagagaacaaagaccaaatagagctttcctttactcag
agatggaacctttctctccgtggaaaacaaatcgttcccttaaatgtagagagaaggtac
atctttcaacgtggcatctcgggatattattcgtatgcaatatttgagcgccttaaaggt
tggccggaggtgtcttttggtcaaataagagccgtttacaagcttcgagaggacaaattt
cgctacatggctctatcggatgacaagcagaggatcatgccaacacaggaagatcgggaa
aaaggacaggccctcgcctacccagaggctgttcgtttgattgatccatcaaatccagaa
cttaagggagaggtggatgacaagtatcagtactcgtcggaaggtaaagataataaggtt
caggggtggatatccgctgacccacccgttgggttctggatcattacacccagcaatgag
ttccgttcggcagggcccatgaagcaagagctcacctcccatgtgggccctactgttctc
tccatgttcatgagtacccattatgcgggagaggaactaaacatgaaatttgaagatgga
gagccatggaaaaaagtttttggtcctatatttgtgtacctcaactcggtttccacaaag
aaggatctccaaaaactttgggcagacgctgaagaccagatgttgcgtgaagtcgagagc
tggccatacaacttcattcaatcagaagatttccccacggccggtcaacgtggaactgtc
atcggtcaattggtagtccgtgaccgctacatgaatgagaaatcactagattgggcggaa
tccgcttatgtgggtttggctgctcctggagaggcgggatcatggcaaagagaaaccaag
ggttatcagttctggacccaggctgacaaggagggacgttttcaaataaaaaatgttcga
cccggggactataatttgtatgcatgggtccctggtgttgttggggattacaaaaataac
accaagattacaattaaaccagggtcagaagtcaaattgggtctaattgtatataggcca
ccgagaaatggtccaactctgtggaaaattggcattcctgaccgcactgccgctgagttc
tatgtaccagacccaaagccaacactcacaaacaaattatataataactcagaaaagttc
aggcaatatggcttatgggataggtatggagatctatatcaggatcaagatcttatctac
actatcaatgttagcgattatcggaaagactggttctatgctcaagttactaggagtacg
aataaacgagtatatgaaggaacaacatggcaaatcaaatttaaactagaaagtgtgaat
aagaatggaaattacacactccaattggccttggcatctgctaattttgctgaattgcag
gttcggttcaatgacctaagtgcacaacctgctcacttttcaacgggacttataggaaaa
gacaatgccatcgccaggcacggaatccatgggttatatcggttttacagcataaaagca
tcaggaaatctattccaagaaggaaataatacgatctatctcacacaatccagggatgga
agtgtttttcaaggagtcatgtatgactatcttcgtcttgaagggcctcctcaatggtga
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