Carya illinoinensis (pecan): 122315227
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Entry
122315227 CDS
T08745
Name
(RefSeq) syntaxin-41-like isoform X1
KO
K08489
syntaxin 16
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122315227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cill04131
]
122315227
Membrane trafficking [BR:
cill04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
122315227
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GFIT
Motif
Pfam:
SNARE
EF-G-binding_N
FlxA
DUF1672
Motif
Other DBs
NCBI-GeneID:
122315227
NCBI-ProteinID:
XP_042986969
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All DBs
Position
7:30486274..30490546
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AA seq
319 aa
AA seq
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MATRNRTVIYRKHRDAVKSVRAPLSSSASGSGGPVIEMASLLNSNRSSYAPLSTEDPGPS
SRDAFTVGLPPAWVDDSEEVAANIQRARVKMAELTKAHAKALMPSFGDGKEDQRLIEALT
LEITDILRRSGKRLQKLSSSGSAEDSNVRKNVQRSLATDLQNLSMDLRRKQSTYLKRLQK
QKEGPEGVDLEMNFSGNKSRLEDDEFDDMSLNEHQMHKLKKSEQFTVEREREINQVMQSV
NELAQIMKDLSVLVIDQGTIVDRIDYNIQTVAVSVEEGLKQLQKAERTQKKGGMVRCATV
LVIMCFVLLVLLILKEILL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggaatcgtaccgtgatttacagaaagcacagagacgccgtgaagagcgtg
cgagctccgttgtcttcttcggcgtccggttcgggcggtccagttatcgaaatggcttcc
cttcttaattctaatcggtcttcttacgctcctcttagtactgaagatcccggtccttca
agtagggatgcatttactgtgggtctaccgccagcttgggtggatgattctgaagaagtg
gctgcaaatatacaacgtgcccgggtcaaaatggctgagttaaccaaggctcatgccaag
gctttaatgccctcatttggagatggaaaagaagatcaacgtttgattgaggctcttact
ctagagattacagacatattgaggaggtctggaaagagattgcagaaactttcttccagt
gggtctgctgaggactcaaatgttaggaaaaatgtacagcgttctcttgcaacagacctt
cagaacctttccatggacctgcgaagaaaacagtcaacatatttgaaacgtttgcagaag
cagaaagagggacctgagggggttgatttggaaatgaacttcagtggaaataaatccaga
ttagaagacgacgaatttgatgacatgagtttgaatgagcaccaaatgcataagctgaaa
aagagtgagcaattcacagtcgaaagagaaagagagatcaaccaggttatgcaatcagtg
aacgagcttgctcaaatcatgaaggacctttcagttcttgtgatagatcagggcacaatt
gttgatcggatagactacaatattcagactgttgctgtatcggttgaggagggtctcaaa
cagctccagaaggcagaaagaacgcagaagaaaggtggaatggtgagatgtgcaacggtg
cttgttatcatgtgctttgtcttgctagtcctcctcatactcaaggaaatactcttgtga
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