Carya illinoinensis (pecan): 122315330
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Entry
122315330 CDS
T08745
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122315330
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cill01007
]
122315330
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122315330
Enzymes [BR:
cill01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
122315330
Amino acid related enzymes [BR:
cill01007
]
Aminoacyl-tRNA synthetase
Class II (A)
122315330
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122315330
Prokaryotic type
Other AARSs
122315330
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Motif
Other DBs
NCBI-GeneID:
122315330
NCBI-ProteinID:
XP_042987119
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Position
7:39931835..39942379
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AA seq
610 aa
AA seq
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MEGSVEEKAKVLDSETESASEQTLSKNARKKELKNKQKEEERRQKEEEKAKQAAAVADSK
GKKSAAVDDEDMDPTQYFENRLKHLAAQRASGVETYPHKFHVSMSILEYGEKYGVLNNGD
HLEDVSVNLAGRIMSKRSSSSKLYFYDLHCGGAKVQVMADASKSDLNEAAFSIFHSNVKR
GDIVGVVGFPGKTKRGELSIFPKSFTVLAPCLHMLPRQKAKGASDNANLKKTEVWVPGSP
RNPETYVLKDQETRYRQRYLDLMLNMEVRQIFKTRSKVIRYIQRFLDDLDFLEVETPMMN
MIAGGAAARPFVTHHNELNLQLFMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHN
PEFTTCEFYMAFADYYDLMEITEKMLSGMVKELTGGYKIKYHANGLDKDPIEIDFTPPFR
RIDMIDTLEKMANLNIPKDLSSDEANKYLKDACIKHEIKCSPPETTARLLDKLVGHFLEE
TCANPTFIINQPEIMSPLAKWHREKPGLTERFELFINKHEVCNAYTELNDPVVQRQRFAE
QLKDRQSGDDEAMAVDETFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMK
PQDEPSAKGA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggagggctcagtagaagaaaaggcgaaagtcctggattcggaaacggaatcagcttcc
gagcaaacccttagcaagaatgctcgcaagaaggagttgaagaataagcagaaggaagag
gaaaggaggcagaaggaggaggagaaggcaaaacaggctgctgctgtggcggattccaag
ggtaagaaatctgcagctgttgatgatgaagatatggacccaacgcaatacttcgagaat
cggctgaaacatcttgcagctcagagagcttccggtgtggaaacatatcctcataaattc
cacgtttcaatgtccatccttgaatatggagagaaatatggagtgctaaacaatggggat
catctcgaggatgtttcagtaaatttggctgggcgcatcatgagtaaaaggtcttcctct
tcaaagctttatttttacgacctacattgtggtggtgctaaagtccaagttatggctgat
gctagcaagtcagacttgaatgaagcagcattttctattttccattctaatgtaaagcgt
ggggacatcgttggtgttgttggtttcccaggtaaaaccaaaaggggggagctaagtatt
tttccaaaatcatttacagtcttagcaccttgtctccatatgttgccaaggcaaaaggcc
aaaggtgcttctgacaatgcgaatttgaagaaaactgaggtctgggttccggggagtccc
aggaatcctgaaacatatgttttgaaagatcaggaaactcgttatcgccaacggtatcta
gatctgatgttaaatatggaggttcggcagatctttaagacgagatctaaggtcatcaga
tatattcaaaggtttctcgatgatcttgatttcttggaggttgaaacgccaatgatgaac
atgattgctggtggagcagctgcccgtccatttgtgacccaccataatgagctgaatttg
cagctgtttatgcgcattgcgcctgagctctatcttaaggaactagttgttggcgggctt
gaccgtgtctatgagataggaaaacaattcagaaatgaaggtattgatttgacgcacaat
cctgagttcacaacttgtgagttctacatggcttttgctgactactatgacttgatggag
atcacggagaaaatgctaagtgggatggtcaaggaacttactggtggatataaaattaaa
tatcatgcaaatgggcttgataaagatccaattgagattgatttcactccccctttcagg
aggattgacatgatcgacacattagagaaaatggcaaaccttaatattcccaaggacttg
tccagcgatgaagccaacaaatatctgaaagatgcatgtattaagcatgagatcaaatgt
tcccctcctgaaacaacagcacgtttgttggacaaacttgttgggcacttcttagaggag
acgtgtgcaaatcctactttcatcattaaccagcccgagataatgagtcctttggcgaag
tggcatagagagaaacctggccttactgaacgttttgaattgtttattaacaagcatgaa
gtctgcaatgcatacactgaactgaacgaccctgttgtacaacggcagcgattcgctgag
caactcaaggatcgacagtcgggtgatgatgaagcaatggctgtggatgaaactttctgt
acggctcttgagtatggtttgcctccaactggtggttggggattgggtattgatcggcta
gctatgttgttaactgattctcaaaacattaaggaggttcttctgttcccggccatgaaa
cctcaagatgaaccttccgctaaaggggcttag
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