Carya illinoinensis (pecan): 122315370
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Entry
122315370 CDS
T08745
Name
(RefSeq) rhamnogalacturonate lyase-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
122315370
Enzymes [BR:
cill01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
122315370
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
122315370
NCBI-ProteinID:
XP_042987173
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Position
7:36455815..36461003
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AA seq
654 aa
AA seq
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MSPLGVRLHYGDHHVVLDNGILQVTLSNPEGIVTGIRYNDIDNLLEVLNDESNRGYWDLV
WSSPQSIGTTGIFDVIKGTKFEVIVENDEQVEISFTRTWDPSMEGKLIPLNIDKRFIMLR
GSSGFYSYAIYEHLEEWPAFNLDETRIAFKLRKDKFHYMAMADNRQRFMPLPDDRLPKRG
QALAYPEAVLLVNPVEPELKGEVDDKYQYSSNNENIRVHGWISTNTDPPMGFWQITPSNE
FRSGGPLKQNLTSHVGPTTLAMFLSAHYSGEDLVPKFGAGELWKKVFGPVFMYVNSGYVG
DDPLQLWEEAKTQMMIEVQSWPYTFPVSEDFPKSDKRGNVRGRLLVRDSYISSDYISAIG
AYVGLAPPGDAGSWQRECKDYQFWTNADEDGYFLISDIRIGDYNLYAWIPGYIGDYKYDV
VVSITEGCEIEMGDLVYKPPRDGPTLWEIGIPDRSAAEFYVPDPNPKYINKLYVNHPDRF
RQYGLWERYAELYPDNDLVFTIGVSDYTKDWFYAQVPRKKKDSNTYQGTTWQIKFTLDNL
DPDGTYKLRLALASSTLSELQVRVNDPKANPPLFSSGLIGRDNSIARHGIHGLYWLYNVD
VPGGQLVQGDNTIFLTQPRSSSPFQGIMYDYIRLEGPPSSTSQKQVMSPLQFTN
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccactaggagtacgattacattatggagatcatcatgtagtactggataatggc
atactccaagtcacattgtccaatccggagggaattgtaactgggattcgatacaatgac
atcgacaacttgcttgaagtccttaacgacgaatctaatagagggtactgggaccttgtt
tggagctcaccacaaagtattggaacaactggtatatttgatgtaatcaaaggaacgaag
ttcgaggttattgttgaaaatgatgaacaggttgagatctctttcacaaggacgtgggat
ccttccatggagggcaaactcatcccattaaatatagacaaaaggtttataatgcttcgt
ggttcatcgggattttactcttatgccatttacgagcacctggaggaatggcctgctttc
aacctcgacgaaaccaggattgctttcaaactcagaaaagacaagttccattatatggca
atggctgacaacaggcaaagattcatgcccctcccagatgaccgattgcccaagagaggt
caggccctggcctacccagaggcagtcttacttgttaacccggtggagcccgaactcaag
ggagaggtggatgacaagtaccaatactcgagtaataacgaaaacattcgggttcatggg
tggatctccaccaatactgacccgcctatgggattctggcaaattacacccagcaacgag
ttccgatctggtggcccactcaagcagaacctgacctcacatgtgggtcccaccacgctc
gccatgtttctaagtgcacattactccggagaggatctggtgccaaaatttggagccggc
gaactatggaaaaaggttttcggtcctgtttttatgtacgttaactctggatacgttgga
gacgacccacttcagctatgggaggaggccaaaacgcagatgatgattgaagttcaaagt
tggccatataccttccctgtttccgaggattttcccaagtccgacaaacggggtaacgtt
agaggtcggcttcttgtccgagacagttacataagcagtgactatatatctgcaattggc
gcttatgttgggttggcgcctcctggagacgctggatcgtggcaaagagagtgcaaggac
tatcaattttggaccaacgcagacgaggatggctattttctcatcagcgacatacgcatt
ggggactataatctttatgcatggatcccggggtatatcggggactacaaatacgatgtt
gttgttagcataaccgaaggatgtgaaattgagatgggcgatcttgtttataagcctccc
agagatggccccacactgtgggaaataggcatacctgatcgttctgccgcagagttctat
gttcccgatcctaatcccaagtacatcaataaactctatgtcaatcatccagacaggttt
aggcagtatggcttgtgggaaagatatgcagaattgtatcctgataatgacttggttttc
actattggtgtcagcgactacactaaggattggttctatgctcaggttcccaggaagaag
aaagacagtaatacatatcaaggaactacgtggcaaattaaatttactcttgacaatttg
gatcccgatggtacctataagctgcggctggcactggcttcttccactctctctgaactg
caggttcgggtgaacgatccaaaggcaaatcctcctctattttcgagtggattgatagga
agggacaactcaattgctagacatggaatacacgggctgtattggctttacaatgtagac
gtaccgggtggtcagcttgtccaaggggataataccatttttttgacacaaccaagaagc
tccagccctttccaagggatcatgtatgattatatccgtttagagggccccccatcttct
acttcccagaaacaagtaatgagtcccttacagtttacaaattag
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