Carya illinoinensis (pecan): 122315379
Help
Entry
122315379 CDS
T08745
Name
(RefSeq) spermatogenesis-associated protein 20 isoform X1
Organism
cill
Carya illinoinensis (pecan)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thioredox_DsbH
Thioredoxin_7
TSP1_2
Motif
Other DBs
NCBI-GeneID:
122315379
NCBI-ProteinID:
XP_042987187
LinkDB
All DBs
Position
7:28640249..28647715
Genome browser
AA seq
867 aa
AA seq
DB search
MALPKSSLTFSHYGKFAIPPKPTTTGCSLLKKPRLSSSFLLHSSMLRRLLLSPSVHRFLS
HPTKFLSFPTPYPSVFTYFSPLTWPFPYIFARPISSLKFLAMAERPSTPESHSRKYTNRL
AAEHSPYLLQHAHNPVDWYPWGEEAFAEARKRDVPIFLSIGYSTCHWCHVMEVESFEDEG
IAKLLNDWFVSIKVDREERPDVDKVYMTYVQALYGGGGWPLSAFLSPDLKPLMGGTYFPP
NDKHGRPGFKTILRKVKDAWDVKRDILVKSGGFAIEQLAEALSANASSNKLPDGLPQNAL
RLCADQLSASYDSKFGGFGSAPKFPRPVEIQLMLYWSKKLEETGKLHEASEALKKVFFSL
QCMARGGIHDHVGGGFHRYSVDECWHVPHFEKMLYDQGQLANVYSDAFSITKDCYFSFVA
RDILDYLRRDMIGQEGEIFSAEDADSAEYEGDARKKEGAFYIWTSEEVDDILGEHATVFK
NHYYVKPSGNCDLSRMSDPHHEFKGKNVLIERQNSAEMASKVGMPVDKYLDILGECRRKL
FEVRSSRPRPHLDDKVIVSWNGLAISSFARASKILKGEEEGTKFYFPVVGCDLQEYMDVA
EKAASFIRRQLYNEQTHRLQHSFRNGPSKAPGFLDDYAFLISGLLDLFEFGGGIEWLLWA
IELQDTQDKLFLDREGGGYFNTPGEDPSVLLRVKEDNDGAEPSGNSVSAINLVRLGSLVA
GTRTDCYRQNAEHLLAVFEARLKDMAMAVPLMCCAADMVTVPSRKQVVLVGHKHSVEFEN
MLAAAHTSYDPNKTVIHIDPSNKEEMEFWDEHNSNITLMAKNNHVADKVVALVCQNFTCS
APVADPESLKVLLSQKSSSSASIGTSK
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggcgcttccgaaatcatccttaaccttctcacattatggcaaattcgcaattcctcct
aagccgacaacaaccgggtgttccctactaaaaaagcctcgtctttcttcttccttcctt
cttcacagttccatgctcagaagactgctcctctctccctccgtccatcgctttctttcc
cacccaactaaatttctatcatttcctaccccatacccttctgtttttacgtacttttcc
ccacttacttggcctttcccgtacattttcgctcgacccatttcctccctcaagttcctg
gccatggctgaacgaccctcgacaccagaatcgcattctcgtaagtacacgaatcgtctg
gctgcggagcacagtccctatcttcttcagcatgcccataaccctgttgattggtacccg
tggggtgaggaagcttttgctgaagcgcgaaagagagacgttcccatcttcttgtcaatt
ggatatagcacttgtcattggtgtcatgttatggaggtggaatcttttgaggatgaaggg
attgccaaattgttgaatgattggtttgtcagtattaaggtagatcgggaagagcggcct
gatgttgataaggtatacatgacttatgttcaggctctgtacggtggtggaggttggcca
cttagtgcctttctttcacctgatttgaagccgttaatgggcggaacttactttccacca
aatgacaagcacgggagaccgggatttaagaccatacttagaaaggtgaaggatgcttgg
gatgtcaagagggatattcttgttaagagtggaggctttgctattgagcagctggcagaa
gcattatcagctaatgcaagttctaataaattacctgatgggctaccacaaaatgcgctc
cgtttgtgtgcagatcaactttccgcaagctatgattcgaagtttggtggttttggatct
gccccaaagtttcccagaccagttgaaattcagctgatgctttattggtccaaaaaattg
gaggaaactgggaagttgcatgaagcaagtgaagctttaaaaaaagttttcttcagcttg
caatgcatggcaagggggggcatccatgatcatgttggaggtggctttcacagatatagc
gtggacgagtgctggcatgttccccactttgaaaaaatgctgtacgaccaagggcagctt
gctaatgtttattcagatgcattttctatcaccaaagactgctacttttcatttgtggct
cgggatattcttgattatttgaggagagacatgatcgggcaagaaggtgagattttttca
gcagaggatgctgacagtgctgaatatgaaggtgatgctagaaaaaaggaaggagccttc
tacatatggaccagcgaggaggttgatgacatacttggagagcatgcaactgttttcaag
aaccattactatgtaaagccttcgggtaactgtgacctttctagaatgagtgatcctcat
catgaattcaagggaaagaatgtgctcattgagagacaaaactcagctgaaatggcatca
aaagttggcatgcctgttgataaatatcttgatattttgggtgaatgtaggcgaaagctt
tttgaagtaagatcaagtcgaccaagaccacatttggatgataaggtaattgtatcatgg
aatggactggcaatatcatcatttgcaagggcttctaaaattctgaagggtgaggaggag
gggaccaaattctacttccctgttgttggctgtgatctccaggagtacatggatgttgct
gagaaggcagcatcttttatcaggaggcaactctacaatgagcaaacgcacaggctacaa
cacagctttaggaatggcccatctaaagcacctggattcttagatgattatgcttttcta
atttcgggattgctggatctttttgaatttggtggtgggattgaatggctactttgggca
attgaactgcaagacacccaggataaattatttcttgatagagagggaggaggctatttc
aataccccaggggaagatccttctgttctcctccgtgtgaaggaagataatgatggggct
gagccctctggcaactcagtttctgcaattaatcttgtaagattgggctccttggttgcg
ggtactaggactgattgttacaggcagaacgctgaacatcttctggcagtctttgaggcg
agactgaaagatatggctatggcagtccctctgatgtgttgtgcagcggacatggtcact
gttccctctcgaaagcaagttgtcttggttggccataagcattctgtcgagtttgaaaac
atgcttgctgcagctcacacatcatatgatcccaataaaactgttattcacatagacccc
tccaacaaggaggagatggaattttgggatgaacacaacagcaatattaccctcatggca
aagaataatcatgttgcagataaagtggttgctctcgtgtgccaaaactttacttgcagt
gccccagtagcagatcctgaatctctcaaggtgctgttgtcccaaaaatcctcctcttct
gcttcaattggcaccagtaaataa
DBGET
integrated database retrieval system
