Carya illinoinensis (pecan): 122315426 Help Entry 122315426         CDS       T08745                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism cill  Carya illinoinensis (pecan) Pathway cill03430   Mismatch repair Brite KEGG Orthology (KO) [BR:cill00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     122315426  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:cill03400]     122315426 DNA repair and recombination proteins [BR:cill03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      122315426 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor NdhM DIOX_N Lambda_ea8_5 EspB_PPE DUF5601 Motif Other DBs NCBI-GeneID:  122315426 NCBI-ProteinID:  XP_042987237 LinkDB All DBs Position 7:complement(31048430..31058215) Genome browser AA seq 1349 aa AA seqDB search MAPSRRQSSGRSPLVNPQRQITSFFSKASPSPSPSPTLSNSKQRPKIASNSFHKSPNSNP DSTPSPCPCPSPTTPSPLQSKLKKPLLVIGASPLTPPVDKSYGEDAVGRRIKVFWPLDKS WYEGSVKFFDRDANKHLVQYDDAEEELLDLGKEKIEWVEESVKKKFKRLRRGSSDSREAM AQDEEVEIVKEDEVDKGYKRSRQRGTKVVVEDEEVENVEETDANSVGGDDDSSDEDWGKN MEEEVIEDGGEDMHLEEDEENEGLTRSKGKLRGNGSGSRKRKVSEGEKLGSTKKSKNGGG GQDTCKGGFKISLTETLSNAVTESGKASNDLGNALMGDAAERFGMRETEKLFFLGEERRD AKRRRPGDANYDPRTLYLPTDFLRSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDA HVGAKELGLQYMKGEQPHCGFPEKNFSMNVEKLARKGYRVLVVEQTETPEQLELRRKEKG SKDKVVKREVCAVVTKGTLTEGEMLSSNPDASYLMAVVEGTLENQNADRLFGVCVVDVAT SRVVLGQFVDDKECSALCCLLSELRPVEIVKPAKQLSTETERVLLRHTRNPLVNELDPLL EFWDAEKTLHEVKNIYSRIVQQSVSGSLNEANFHGIHSHMEENGLGCLPDVLSDLVRSGE NGSCALSALGGTLFYLKQAFLDETLLRFAKFELLPCSGFGNIVSNQYMVLDAAALENLEI FENSRNGDSSGTLYSQLNHCVTAFGKRLLKSWLARPLFHPELIRERQDAVAGLRGINLAC AIEFRKALSRLPDMERLLARVFASSEAQGRNANKVVLYEDAAKKQLQEFISALRGCELMA QACSSLGVILENVESRVLHHLLTPGNGLPDIHSVINHFKDAFDWVEANNSGRVIPHGGVD TEYDSACKRVKEVESSLTKHLKEQRKLLGDASITYVTVGKEAYLLEVPESLRGSIPRDYE LRSSRKGFFRYWTPNIKKLLGELLQAESEKESMLKSILQRLIGRFCEHHNKWRQLASATA ELDVLISLAITSDFYEGPTCRPTIIGSSNPDEVPCFSTKNLGHPVLRSDSLGKGTFVPND ITIGGPGRPSFILLTGPNMGGKSTLLRQVCLAVILAQVGADVPAENFELSPVDQIFVRMG AKDHIMAGQSTFLTELSETALMLSSATCNSLVALDELGRGTSTADGQAIAESVLQHFVHK VQCRGLFSTHYHRLAVNYQKDPKVSLCHMACRVGNGVGDVEEVTFLYRLTPGACPKSYGV NVARLAGLPDSVLQKAAAKSREFEDTYGKDKKKFENNLSNRSWVDEMVELVQKFVDVAET LGCHESPENVGLSSLTELRQRVQILMQKS NT seq 4050 nt NT seq  +upstreamnt  +downstreamnt atggcaccatcacgccgacagagtagtggccggtcgccactcgttaacccacagcgtcaa atcacttccttcttctccaaagcgtctccgtctccttcaccttctcccactctctccaac tccaagcaacgccctaaaatcgcttccaattctttccataaaagccctaactccaatccc gattctactccaagcccttgcccttgccctagccctaccaccccttcccctctccaatcc aagctcaagaagcccctcttagtcatcggcgcgtctcccttaactccccccgttgataaa tcctacggtgaggatgctgtggggaggaggatcaaggtcttttggccgttggataagtcc tggtacgagggttccgtgaaattcttcgacagagatgctaataagcatttggttcagtac gatgacgctgaggaggaattgctggatctggggaaagagaagattgagtgggtcgaagag agcgtgaagaagaaattcaagcggttgcggcggggttcttcggattcgagggaggcgatg gctcaggacgaggaggtagagatcgttaaggaggacgaggttgataagggatataagcgg tcgcggcagcgcggtacgaaggtggtggtcgaggatgaggaggtcgagaatgttgaggag actgatgctaatagtgttggtggtgatgatgattctagcgatgaagattggggaaaaaat atggaggaagaggtgattgaggatggtggggaggatatgcatttggaggaggatgaagag aatgaagggctaacgaggtcgaaaggaaaacttagagggaatggcagcgggtcgaggaag cgtaaggtcagtgagggagagaagcttgggtctactaagaagagcaagaatggcggtggt ggccaggatacttgtaagggaggtttcaagatttctttgacggagactcttagtaatgcg gttacggagagtgggaaggcatctaatgaccttggcaatgccttaatgggcgatgctgca gaaaggtttggtatgcgtgagactgaaaagttattcttcctcggggaagaacgcagggat gcaaaaagaagacgtcctggtgatgcaaactatgatccgaggactctttacttgcctact gattttctaagaagtttgtcaggcggccagagacaatggtgggagtttaagtcgaagcat atggacaaggttttatttttcaagatgggcaagttttatgaactttttgaaatggatgca catgtaggggctaaagagcttggcttgcaatatatgaagggagaacaaccgcattgtgga ttcccagaaaagaacttctcaatgaatgtggagaaattggctagaaagggttatcgagtt cttgttgttgagcagacagaaacccctgaacagctagagcttcgtcgcaaagaaaaaggt tccaaggataaggttgtcaaacgtgaagtatgtgcggtggttacaaaaggaacactaact gagggagagatgctgtcatcaaatcctgatgcttcttacctaatggcagtggtagaaggc acactggaaaaccaaaatgcagatcgcctttttggtgtttgtgtggtagatgttgctacc agcagggttgttcttggacagtttgtggatgataaggagtgcagtgccttgtgttgtctc ttgtctgagttgaggcctgtggaaattgtaaaacctgcaaaacagctcagcactgaaaca gaaagagtactgctgagacacacaagaaatcctttagtgaatgagttagatccactcttg gaattctgggatgctgaaaagactttgcatgaagttaaaaatatctacagccgcattgtt caacaatcagtttctggatctctgaatgaagcgaattttcatggtatccattctcacatg gaggaaaatgggctgggttgcctaccagatgttctttcagacctagtgaggtcaggggag aatggcagctgtgcactctcagctcttgggggcactcttttctatcttaagcaggctttc ctggatgaaacattacttcgttttgcaaagtttgagttacttccttgctctggttttggt aatattgtctcaaaccaatacatggttcttgatgctgctgcactggagaaccttgagatt tttgaaaatagcagaaatggagactcttcagggacactctactcccaattgaaccactgt gtgacagcatttgggaagaggttgctcaaatcatggcttgcaaggcctctttttcatcca gagttaattcgggaacgccaggatgctgttgcaggtttacggggaattaatctagcttgt gcaattgaatttcgaaaagcattgtccaggctcccagacatggagcggttgcttgcacgt gtttttgccagcagtgaagctcaaggaaggaatgccaacaaagtggttctatatgaggat gcagcaaagaaacagctccaagagttcatttcagccctacgtggttgtgagttaatggcc caggcatgttcttcactgggtgttattttggaaaatgttgaatccagagtcctccatcat ctgttaacacctggtaatggtctccctgacattcattcagtaattaatcatttcaaggac gcctttgattgggtggaagctaataattcagggcgtgtaataccccatggaggagttgat acagagtatgactctgcctgtaaaagagtcaaggaggttgagtctagtttaacgaaacac ctcaaggaacagcgaaagttgcttggagatgcatcaattacatatgtcaccgttgggaaa gaggcatacctcttagaagtaccagagagtttgcgggggagcatccctcgtgattatgag ttacgatcatctagaaagggcttcttcagatattggactccaaatatcaaaaagttgttg ggagagctcttgcaagcagaatctgaaaaggaatccatgctgaaaagcattttgcagagg ttaattggacgattctgtgagcatcataataagtggagacaattggcttctgctactgct gagctggatgttttgatcagtcttgcgattacaagcgacttttatgaagggccaacatgc cggccaaccataataggttcatcaaatccagatgaagtgccatgcttttcaacaaaaaat ttggggcatcctgtacttagaagtgattctttaggcaagggaacatttgtccccaatgac attacaattggtggtcctggtcgacccagcttcatccttctcactggcccaaatatgggt ggaaaatcaactcttcttcgccaagtgtgcttggctgtaattttggcacaggtaggggct gatgttcctgcagaaaacttcgagctgtcacctgtggaccaaatctttgttcggatgggt gccaaagatcacattatggcaggccaaagtacctttctgactgaactttcagaaactgcg ttgatgctgtcttcagccacttgcaattcgttagtggcattggatgaacttggacgtggg acatcaactgcagatggacaagccattgccgaatcagttcttcaacattttgtacacaaa gtgcagtgccgaggattgttttctacccactatcaccgattagctgtaaactatcagaaa gatcccaaggtttccctctgtcatatggcatgtagagtgggaaatggggttggagatgtg gaagaagttacatttctttacaggttgacacctggtgcgtgccctaaaagctatggtgtt aatgttgcaaggttagccggacttcccgattccgtacttcaaaaggctgctgcaaagtct agagaattcgaggatacatatggtaaagacaagaagaaatttgaaaataacttatccaat cgaagttgggttgatgaaatggtagaacttgtccagaagtttgtagacgttgcagaaact ttggggtgccacgagtctcctgagaacgttggtcttagcagcctgaccgaacttcgacaa agggttcagatactaatgcagaaaagttga

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