Carya illinoinensis (pecan): 122315446
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Entry
122315446 CDS
T08745
Name
(RefSeq) F-box protein SKIP17-like isoform X1
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122315446
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122315446
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
122315446
NCBI-ProteinID:
XP_042987267
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Position
7:complement(25604056..25615335)
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AA seq
540 aa
AA seq
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MDALPDTQTSMAKRPCPCPYQIPLLQSTPPPHHMDLLLESFLALSDSPSSSSSSSFSIDL
SFDRLLESRASSDADQKLLIDRALQLGSDLLEAAKRSARKHASKHNSLAWALPPDLTIKV
FSMLDTQSLCYAAATCSLFNKCARDPSCYADIDLTTVVPKVNNAVVSTMIHRAAKSLRSL
KLGIVPGPTVTPGSCQTPGSCQPLVYTIKNSVDVSNFSWNDKRSRQGRESSILTRSCLSP
LVGDNAAAGTLLRVLHLYNIERMDNTSLCGALSACPSLLDLEIVGLHVELRQTLMSVSAN
CHLMERLFFESSKIGRDDSLKSATCIDLVSNCPHVSSLALRGFKLHDYKVRILVKGFWKL
RYVDFSTSYSITGAFLWNLGSSVGGNLLEVLILRDCMHLKEVEVARILTAVLAGDFKSLR
HLDISNKEGLASEGDWYERCYKSSVIPIKQVLAERPDMCFLAEFPTEGSYIGTDQMLDSG
QDSEISLPSQFSSHTSDASIFMSSAESSYNSDQGSGNEDGREAGYVIYEESSDEVDFLML
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggatgccctcccagacacccaaacctccatggccaagcgcccctgcccttgcccctac
caaatccctttgctccaatcaacaccgcctccccaccacatggacctccttctcgaatct
ttccttgccctatccgactccccatcttcctcttcctcttcctctttctccatcgacctc
tccttcgatcggcttctcgagtcccgggcctccagcgacgcggatcagaaacttctcatc
gaccgtgccctccagttgggctccgacctcctcgaggccgccaagcgctccgctcgaaag
catgcctccaagcacaactcccttgcctgggccctccctcccgacctcaccatcaaggtc
ttttccatgcttgatacacaaagcctatgctatgcagcagctacttgttcgttgttcaac
aagtgtgccagggatccttcatgctacgctgacattgacttgacaacagttgtcccaaag
gttaacaatgcagttgtgtccacaatgattcaccgagctgcaaaatctctccggtctctt
aagcttggcatagttccaggcccaacagtgacacctggatcctgtcagacacctggatcc
tgtcagccattggtttataccataaaaaactctgtggatgtgtctaacttttcatggaat
gataaaagatcaagacaagggagggagtcttcaattcttactagatcctgtttgagccca
ttagttggtgataatgcagctgcagggactcttttgagagtgttgcatctttacaatatt
gaaagaatggataacacttcactttgtggggcattgtcggcttgtccatctctccttgat
ctggaaattgttggccttcatgttgaattgaggcaaacattgatgtcagtgagtgcaaac
tgccacttaatggagcggctgttctttgagtcttcaaaaataggcagggatgacagttta
aaatcggcaacctgcattgatcttgtaagcaattgtccgcatgtatcttcattggcgctt
agagggtttaagctccatgattataaagttcgcatacttgttaagggattttggaagcta
agatatgttgatttttcaacatcgtactcaatcactggagcatttttatggaaccttggg
agcagtgtgggtgggaatttacttgaggtcttgattttacgggactgcatgcatctcaaa
gaggtagaagttgctcgtattttaacagcagttcttgcaggggattttaagagcctcaga
catcttgacatatccaataaggaaggtttagcttctgagggtgactggtatgaaagatgc
tacaagtctagtgtcattcctataaagcaggttttggcagaaaggcctgatatgtgtttt
ctggctgagtttccaactgaaggaagttacattggaactgatcaaatgcttgacagtggg
caagatagtgaaatcagtttgccatcacagttcagcagtcatacatcagatgcttctatt
tttatgagttcagctgagagcagctacaacagtgatcagggtagtggcaatgaggatggt
cgtgaagccggttatgttatttatgaagaaagctctgatgaggtggactttctgatgctg
tag
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