Carya illinoinensis (pecan): 122315570
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Entry
122315570 CDS
T08745
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122315570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cill02000
]
122315570
Transporters [BR:
cill02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
122315570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_16
AAA_29
ABC_trans_N
AAA_25
AAA
AAA_28
nSTAND3
ABC_ATPase
AAA_30
RsgA_GTPase
DO-GTPase2
TIP49
Motif
Other DBs
NCBI-GeneID:
122315570
NCBI-ProteinID:
XP_042987486
LinkDB
All DBs
Position
7:complement(42519577..42527723)
Genome browser
AA seq
1455 aa
AA seq
DB search
MESREIYRGSSPPTCSPNIWRNSSMEIFSRSSRQEDDEEALKWAALERLPTYDRIRRGVL
TNAEGQAREIDIKTLGLLERKALLDRLVEIAEKDNEKFLLKLKDRIVRVGLDIPTVEVRF
EYLNVEAEIYVGSRALPTICNFLVNMLEGFLNYLPIHQSRKIPLPILQDVSGIIKPQRMT
LLLGPPSSGKTTLLLALAGKLDKDLKFSGSVTYNGHGMEDFVPQRTSAYISQHDLHIGEM
TVRETLAFAARCQGVGPRYETLAELLRREKAANIKPDPDLDIYMKAAALEGLETSIVTDY
VLKILGLEVCADIIVGDEMLRGISGGQKKRVTTGEMLVGPAIALFMDEISTGLDSSTTFQ
IVNSLRQTIHILSGTAVISLLQPPPETYELFDDIVLLSDGQIVYQGPRENVLEFFRYMGF
KCPARKGVADFLQEVTSRKDQEQYWARKDAPYSFVTVKDFAKAFRSFHIGCKLDDELATP
FNKSKSHPAVLTANKYGVSKKELLRACVWREFLLMKRNSFVYIFKISNLTFLAFITMTLF
LRTEMHRDTITDGGIYLGALFFTVLVAMFNGISELNMAVIKLPIFYKQRDLFFYPSWAYA
LPAWLLKIPITFVEAAVWVVMTYYVVGFDPDIGRFFKQYFLIMCINQMASGLFRFMAALG
RNAIVASTVGAFALLAVQVLGGFIISRDDVQKCWYWGYWVSPLMYGQNAISVNEFLGKSW
RHVPPNSSEPLGVLILKSRGIFPRADWYWIGVGALIAYIFVFNFLFTLALQYLNPFGKSQ
AVMSKETLADRNVNRSEQFIELSSRGKGSPEQGTEALGSISSCSLSARVGRIDQAYQNRK
RGMVLPFEPLSLTFDEIRYAVDMPQEMKNQCTHEDQLELLKGVSGAFRPGVLTALMGVTG
AGKTTLMDVLAGRKTSGYIQGSIKISGYPKKQETFARISGYCEQTDIHSPYVTVYESLQY
SAWLRLAPEVDSSTRMMFIEEVIELVELTSLREALVGLPGVSGLSTEQRKRLTIAVELVA
NPAIIFMDEPTSGLDARAAAIVMRAVRNTVDTGRTVVCTIHQPSIDIFDAFDELNVAFQL
LLLKVGGEQIYAGPLGCQSSHLIKYFEELNGVPKIRDGYNPATWMLEVTSAGQEASLGLN
FTDVYKNSELYRRNKALIKELSAPPLDSKDLFFHTQYSQSFFTQCTACLWKQHWSYWRNP
SYNAVRLLFTSMIALLFGMIFWDIGSKRRRQQDLFNAMGSMYTAVLFLGVQNGMSVQPVV
GTERTVFYRERAAGMYSALPYAIGQVVIELPYSFLQTVIYGVIVYAMMGFEWKVGKFLWY
LFFMYFTLLYFTFYGMMTVAITPNHNIATILSSSFYAIWNIFSGFVIPQTRIPIWWKWYY
WACPVAWTLYGLVVSQYGDVKDKLESGETVEDFVRSYFGFRIEFVGVIAVVLVGIPVLFA
SIFAFSIKALNFQTK
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcgtgaaatttacagaggtagtagtccgccgacatgcagccctaacatctgg
aggaacagttccatggaaattttctcaaggtcttcgcgacaagaagacgatgaagaagct
ctcaaatgggctgctttagagaggctgcctacttatgaccgtataaggagaggtgtactc
actaatgcagagggtcaagccagagagattgacataaagactcttggattactggagaga
aaggctttgctagataggctggtggaaattgcagaaaaagataatgagaagttcttgtta
aagctcaaggatcgcatagttagagttggacttgatattcctactgttgaagttcggttt
gagtacctaaatgtggaggctgaaatttatgttggaagcagagcattgcctacaatatgt
aacttcttggtcaatatgttagagggattcttaaactatcttcccattcatcaaagtaga
aagatacccttaccaatccttcaagacgttagtggcatcatcaagcctcagagaatgaca
ttgcttttaggccccccgagctctggaaagaccacactattgctagctttggctggaaaa
ctcgataaagatttaaaattttcgggaagtgttacctacaacggacatggaatggaagat
tttgtgccgcagaggacatcggcttatataagtcaacatgatctccacataggagaaatg
acagtgagagaaacactggcttttgcagcgagatgtcagggggttggtccacgttatgag
acattggcagaattattaagaagagagaaggctgcaaatattaagccagatcctgatctt
gatatctatatgaaggcagcagcactagaaggactggagaccagtatagttactgactac
gttctcaagattttggggcttgaagtctgcgctgatattatcgtgggggatgaaatgtta
agaggcatttctggtggacagaaaaaacgagtcacaacaggggagatgctggttggacca
gcaatagcattgttcatggatgagatatccactggtttggacagctcaacaacttttcag
attgtaaattcactgaggcagaccatccacattctcagtggaactgcagttatctctctt
ctccagccacctccagaaacttacgaattatttgatgatatagttctcctctcggatggg
caaattgtgtatcaaggtccccgcgaaaatgtccttgagttttttcgatatatgggtttc
aaatgtcctgcgaggaaaggagttgcggacttcttacaagaagtaacatcaagaaaagat
caggagcagtactgggcacgtaaagatgcgccttacagctttgttactgtgaaagacttt
gccaaagcatttcgctcatttcacatcggttgcaaacttgacgacgagcttgctactcca
tttaacaagtccaaaagccaccctgctgttttaactgctaacaagtacggtgttagcaag
aaagagctattgagagcttgtgtttggagagagttcctactgatgaagagaaactcattt
gtctacatcttcaaaataagcaatctcactttcttggctttcataacaatgacattgttt
ttgcgaactgagatgcatagagatacaataacagacggtggtatctatttgggtgctctt
ttctttacggtacttgtagccatgtttaacggaatatcagagctcaatatggctgttatc
aaacttcccattttctacaagcaaagagaccttttcttctatccttcgtgggcatacgct
ctacccgcatggctcctaaagattccaattacctttgtagaggctgccgtttgggtggtc
atgacttattatgttgtaggctttgatccagacattggacggtttttcaaacaatatttt
ttgatcatgtgcattaaccagatggcatctggattgttccgatttatggctgcattagga
aggaacgcgattgtggccagcacagttggtgcattcgctttacttgcagtgcaggttctg
ggaggattcatcatatctcgagacgatgtgcagaaatgttggtactggggttattgggtc
tccccgctgatgtatggacagaatgccatatctgtaaacgaatttcttgggaagagttgg
agacatgtacctcctaattcatcagaaccgttaggagttttgatcttaaagtctcgcggg
atttttccacgggcagattggtattggattggagtaggagctttgattgcgtatattttt
gtgttcaatttccttttcactttggctctacagtatctcaatccttttggtaagtctcag
gcagtgatgtcgaaagagaccttggctgatagaaacgttaacagatctgaacagttcatt
gagctatcatctagaggaaaaggctctcccgaacaagggactgaagctctaggaagtata
tcatcctgctctctatctgcaagggtgggtagaattgatcaagcttatcaaaacaggaag
cgaggaatggttcttccttttgaacccctatccctcacttttgatgaaatcagatatgct
gtagacatgccacaggaaatgaaaaatcaatgtactcatgaggatcaacttgaacttttg
aagggtgtgagtggtgctttcaggccaggagtcctaacagctctaatgggtgttactggt
gctggtaagaccacactaatggatgtcttagccggaaggaaaaccagtggatatatccag
ggaagcatcaaaatttctgggtatccaaagaagcaagaaacatttgcccgcatatcagga
tactgtgaacaaactgatatccactctccttatgttacagtctatgagtctttgcaatat
tctgcatggcttcggttagcccctgaagttgactcttcaacaagaatgatgttcattgag
gaagtcatagagctcgtggagctgacctcattaagagaagcactagttggactgccaggt
gtgagtggcctctcaaccgagcagcgcaagaggctgacaattgcagttgagcttgttgcc
aacccagctataatattcatggatgagccaacctctggccttgatgccagggcagcagca
atagtaatgagagcagtgaggaacactgtggacacaggaagaacagtggtttgcacaatt
catcagccaagcattgatatatttgatgcctttgatgagttaaatgttgcctttcagtta
cttcttttgaaagtgggaggggagcaaatatatgctggtccattaggctgccagtcttca
catctgatcaagtacttcgaggaattaaatggagttcctaaaattagagacggctataac
cctgcaacttggatgttggaggttacttcagcagggcaagaagcatctcttggtttaaat
ttcactgatgtgtacaagaactcggaactatataggagaaacaaagcattgatcaaggaa
ctaagtgcaccgccactggattccaaagatctattcttccatactcagtactcacaatcg
ttcttcacccaatgcaccgcttgcctatggaaacagcattggtcgtattggcgaaatcca
tcatataatgctgtgagactcttatttacaagtatgatagctctgttgtttgggatgata
ttctgggatattggttccaaaaggagaagacaacaagatctgttcaatgcaatgggttcc
atgtacaccgctgttctgtttcttggagtacaaaatggtatgtcggtgcagccagttgtg
ggtactgagagaacggtattttatagagaaagagcagctggaatgtattctgctctgcca
tatgccattggacaggttgttattgagcttccgtacagtttccttcagactgtcatttat
ggggttatagtatatgccatgatgggattcgaatggaaagtgggcaagttcttatggtat
cttttcttcatgtacttcaccttattatatttcacattctatgggatgatgaccgtggct
ataactcccaaccacaacattgccaccatactttcatcttccttctatgcaatatggaac
attttctctggattcgttatcccccaaacgaggattccaatatggtggaaatggtactac
tgggcttgccccgttgcttggaccttgtacggattggtggtttcacaatatggagatgta
aaggacaaactcgagtctggtgaaacagtggaggactttgtcaggagttattttgggttt
agaattgagtttgtgggtgtcattgcggtcgtgcttgttgggatcccggtgctctttgca
tccatctttgccttctccataaaggcattaaactttcaaaccaaatga
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