Carya illinoinensis (pecan): 122315580
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Entry
122315580 CDS
T08745
Name
(RefSeq) protein HASTY 1
KO
K14289
exportin-5
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122315580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cill03016
]
122315580
03036 Chromosome and associated proteins [BR:
cill03036
]
122315580
Transfer RNA biogenesis [BR:
cill03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122315580
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
122315580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
Kinase-like
Motif
Other DBs
NCBI-GeneID:
122315580
NCBI-ProteinID:
XP_042987507
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All DBs
Position
7:1220983..1242621
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AA seq
1209 aa
AA seq
DB search
MEDSATNTANNVARAIAAALDWASTPDARKAAVSFLESIKAGDVRILASTSFLLVRKDWS
SEIRLHAYKMLQHLVRLRWEELSPTERSSFANVAVDLMSEIANPCEEWALKSQTAALVAE
IVRREGLVLWQELFPSLTTLSSKGPAQAELVSMMLRWLPEDIMVHNEDLEGDRRRLLLRG
LTQSLPEILPLLYTLLERHFVAALSAARNQELDVAKQHAATVTTTLNAVNAYAEWAPLPD
LAKYGIIQGCGFLLSCPDFRLHACEFFKLVSPRKRPIDVSASEYVSAMSNTFQILMNACR
EFLCRSSSSSVVIDENEFEFAECICESMVSLGSSNLQCIAGDSTLLPLYLQQMLGFFQHS
KLALHYQSLLFWLALMRDLMTKPKVVAHSAGDSSAVNSLSTIPGQADSEKRKILSFVSDD
ICSAILDISFQRMLKREKVLPGTTYTLGALELWSDDFEGRGDFGQYRSRMSELIRFIASY
KPLIAGANVSERIITIIKHLLLSQMPSQDLAVMESMQLALDNVVNAVFDGTNEFGGGSSE
VQLALCRIFEGLLQQLLALKWTEPALVQVLGHYLDALGPFLKYFPDAVGSVINKLFELLN
SLPLVVKDPSTSSARHARLQICTSFIRIAKAADKSILPHMKGIADTMAYMQREGCLLRGE
HNLLGEAFLVMASAAGIQQQQEVLAWLLEPLSQQWTQVEWQNSYLSEPLGLVRLFSETPT
MWSIFHTITFFEKALKRSGFRRAQANLQNNSTSSSTLLHPIGSHLSWMLPPLLKLLRAIH
SLWSPSIYQVLPGEVKAAMTMTDSELFSLLGEGVPKLSKGVLTFTDGSYADMGKEGTAEP
NESDIRNWLKGIRDSGYNVLGLSTTIGDSFFQALDIHSVALALVENIQSMEFRHIRQLVH
SFFIPLVKYCPSDMWEIWLEKLLHPLFHYSQQALSCSWSSLLHEGRVKVPNIHKIFAGSD
LQVEVMEEKLLRDLTREICSILSAIAGPPLNTALTSLEQSGHISRVDTSSLKDLDAFASN
SLVGFLLMHKGLAIPALQICLEAFTWTDGEAVTKVSSFCAAVVVLTISTNNAELLQFVSK
DLFSAIIQGLALESNAIISADLVALCREIFVYLCDRDPAPRQILLSLPCIKPHDLVAFEE
ALTKTSSPKEQKQHMRSLLLLASGNKLKALAAQKSVNVITNVSTRPRNLVNTAETRSDDG
DVVGLAAIL
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atggaggacagtgccaccaacacagccaataatgtggcccgagccatagccgcagccctc
gactgggcttccactcccgatgctcgcaaagccgccgtttctttcttagaatccatcaaa
gctggagacgtacggatcctagctagcacatccttccttctagtcagaaaggactggtct
tcagaaattcggttgcatgcatataagatgttgcagcatctggttcggctgcggtgggaa
gaattaagccctacagaacgtagcagctttgcaaatgtcgctgttgatttaatgtctgag
attgcaaatccttgtgaggaatgggctttgaaaagtcaaacagctgcccttgttgctgag
atagttagaagagaaggcttagttctatggcaagaactgttcccgtctctaactaccctg
tccagcaagggtcctgcacaagctgagttggtctcaatgatgctgagatggcttcctgaa
gatattatggttcacaatgaagatttggaaggtgatcggcgtaggctattgttgcggggg
cttacccaatctttgcctgaaattttgcctttattatacaccttactagaacgacacttt
gtggctgcattgagtgcagcacgtaatcaagaactggatgttgcaaaacaacatgcagcc
actgtaacaactactttaaatgctgttaatgcatatgcagaatgggctccgttgcctgat
cttgctaaatatggcataattcaggggtgtggtttcttactttcttgtcccgactttcgt
cttcatgcttgtgagtttttcaaacttgtctctccaaggaagagacctatcgatgtctct
gcttctgaatatgtttctgcaatgagtaatacctttcagatcttgatgaatgcctgtaga
gaatttttgtgccgatcaagctctagttctgtagttattgatgaaaatgaatttgagttt
gctgaatgtatatgtgagagtatggtgtctttgggttcttccaacttgcagtgtattgct
ggtgatagcacccttcttcctctttatttacaacagatgctgggattttttcaacactct
aagctagctcttcattatcaatccctgctcttttggctggcactgatgagagacttgatg
acaaagccaaaggtggttgcacattcagccggagacagttcagctgttaatagtctaagc
accattcctggacaggctgatagcgagaagagaaagatcttgagttttgtgagtgatgat
atttgtagtgcaattctggatatatctttccagcgcatgctcaagagagagaaggttctt
cctggaaccacttataccctgggggcattggagttgtggagtgatgattttgagggcagg
ggtgactttggccagtatcgttcaaggatgtcagagttgatccggtttattgcttcttac
aagcctctaatagctggtgctaatgtttctgaaagaattattacaatcatcaaacacctg
ttactttctcaaatgccttctcaggacttggctgtgatggaaagtatgcaattggctcta
gataatgttgtgaatgcagtctttgatggaacaaatgaatttggcgggggtagttctgaa
gttcaacttgcactgtgtagaatatttgaaggtttactccagcaacttcttgctttgaag
tggactgagccagcacttgtgcaagtacttggacactatttagatgcactgggtcccttc
ttgaagtacttcccagatgcagttggtagtgtcatcaataagctattcgagctcctaaac
tcactacctcttgttgttaaggatccttccacaagtagtgcacgacacgcaaggctgcag
atttgtacatcatttattcgaatagccaaagctgctgacaaaagcattctgcctcacatg
aagggtatagctgacaccatggcatatatgcaaagagaaggttgtttgcttcgtggtgag
cataatcttcttggggaagcatttctcgtaatggcctctgctgcggggattcaacagcag
caagaagttctggcatggttattagaacccttgagccaacaatggacacaggttgagtgg
caaaatagctatttgtctgaaccactaggtctggttcgcttgttctctgagacaccaacc
atgtggtctattttccacactattacattctttgagaaggcacttaagaggagtggattt
aggagagcccaggcaaatttacaaaacaactcgacatctagctctacgttattgcaccca
attggttctcatctgtcttggatgctgcctcctcttttaaaactgcttcgtgctatacat
tctctttggtctccatctatatatcaagttctgcctggagaagtaaaagctgcaatgacc
atgactgattctgagctattcagcctcttaggggaaggggttcctaaattatcaaagggt
gtattaactttcacagatggatcttatgctgacatgggtaaggaaggaactgcagagcca
aacgagtctgatatacgaaactggctgaaaggtatcagagatagtgggtataatgtattg
ggcctgtcaacgaccatcggagattcatttttccaagctttggatatacattcagttgct
ttagccctagtggagaatatacagtcaatggagttcaggcatataaggcagcttgttcat
tcattttttattcctttggttaaatattgcccttctgatatgtgggagatctggctagaa
aaacttctgcaccctttatttcattattctcagcaagctctcagctgctcatggtccagt
cttctgcatgaaggcagggtaaaggttccaaacatccacaaaatatttgctgggtcagac
ttacaagtggaagtaatggaagaaaagctactccgagatctaactcgtgaaatatgttca
atcctctctgctattgctgggccaccgttaaatactgcccttacttctttagaacagtct
gggcatattagtcgtgtggatacgtcttctctcaaagatttggatgcatttgcatcgaac
tctttggttggtttcctgttgatgcacaaaggtctagccattccggccttgcagatatgt
ttagaagccttcacttggacagatggtgaagccgtgacaaaagtttcttccttctgtgct
gctgtggttgtcctaaccatatcaacgaataatgcagaacttctacaatttgtttctaaa
gatttgttttctgcaattatccaaggattggcactcgagtcaaatgctattatcagtgca
gatctggttgctctctgtcgtgaaatatttgtttatctctgtgatagggatccagctccc
aggcagattttgctctcactgccgtgtatcaaaccacatgatttggttgcttttgaagaa
gctttgacaaagacatcaagtcctaaggaacagaagcagcatatgaggagcttgcttttg
ttagcttctggaaacaagttaaaagcccttgctgctcagaaaagtgtaaatgttattaca
aatgtttcgacgaggcctcgcaatttggtgaatactgcagaaaccagatctgatgatggg
gatgttgtggggttggcagccattttgtga
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