Carya illinoinensis (pecan): 122315666
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Entry
122315666 CDS
T08745
Name
(RefSeq) EIN3-binding F-box protein 1-like isoform X1
KO
K14515
EIN3-binding F-box protein
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill04016
MAPK signaling pathway - plant
cill04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
122315666
04075 Plant hormone signal transduction
122315666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122315666
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122315666
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
122315666
NCBI-ProteinID:
XP_042987662
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Position
7:42804508..42808930
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AA seq
648 aa
AA seq
DB search
MSKIFGFSGNGDSCAGGSIYPNPKESSLFLPLGHRVDVYFPPCKRSRIRAPFFFSGETFE
QKKCASIEVLPDECLFEIFRRLPGGQERSACASVSKRWLMLLSNICHDEFCSNATTGYLR
PEEKSTENKAEDQEIETDGYLTRSLEGKKATDVRLAAIAVGTASRGGLGKLLIKGSSSAC
RVTDVGLKVIARGCPSLKSLSLWNVPSIGDEGLCEIANRCHLLEKLDLCQCPKISDKAVL
AIAKNCPNLTDLTLESCSIGNEGLQAIGRCCSNLKSISIKECPRIGDQGIASLLSSTSYV
LTKLKLQALNITDVALAVLGHYGKAVTDLVLINLPNVSERGFWVMGNGHGLQKLKSFSVT
SCRGVTDTGLEAVGKGCPNIKQLCLRKCAFLSNGGLVSFAKAAGSLESLQLEECHMITQV
GLFGALLNCGAKLKALAMVNCLGMKDLNMGLHLPSPCNSLRSLSIRNCPGFGNASVAMLG
KLCPQLQHLDLSGLQGITDTGFLPLLESCEAGLVKVNLSGCVNLTDKVVSSLVELHGWTL
EVLNFDGCRKISDASLVAIADNCPLLSDLDVSKCAVTDCGIAALAQANQFNLQILSVSGC
PLVTDKSLPALEKLGQSLLGLNLQHCNAMGISTVDLLVDQLWRCDILY
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagatcttcggtttcagcggaaatggtgattcttgcgctggggggtcaatttac
ccaaaccctaaggaatctagcctctttttgccgcttggtcatcgggtggatgtctatttt
ccaccttgcaagaggtctcgcatccgtgcaccgttttttttcagtggagagacgtttgag
cagaagaagtgtgcctctattgaagttttgccagatgaatgcctctttgagatcttcaga
cggttgcctggaggccaggagaggagtgcctgtgcttctgtttccaagcgttggcttatg
cttctgagcaacatctgtcatgatgaattctgcagcaacgcaaccactggatatttgagg
cctgaagaaaagagcactgagaataaggctgaagatcaggaaattgagactgatggctac
cttaccaggagcttggaaggaaagaaagcaacagatgttagacttgctgccattgctgtt
ggaactgccagtcgtggtggactaggcaagcttttgatcaagggaagcagctctgcttgc
agggtgactgatgttggcctcaaggtgattgctcgtggctgcccttccctaaaaagtctc
tctctctggaatgttccatccataggagatgaaggtctgtgtgaaattgctaataggtgt
catctgcttgaaaagcttgacctttgccaatgtccgaaaatttctgataaggctgtgctt
gcaattgccaaaaactgccctaatctgactgatttaacactagagtcatgttcaattggg
aacgaaggtctgcaagctattggacgctgttgctccaatctaaagtccatttcaattaaa
gagtgcccccgtattggggatcaaggaattgcaagcttgttatcttccacctcttatgtt
ttgacgaagttgaagctccaggcattgaacattactgatgtagctctggctgttcttgga
cactacggcaaggcagtaactgatcttgtcctcattaatcttccaaatgtaagtgagagg
ggcttctgggtcatgggcaatggccatggattgcagaaattgaagtccttctcagttaca
tcttgccgaggagttacagatactgggcttgaagctgtagggaaaggttgcccaaacata
aaacagttgtgtctccggaaatgtgcttttttatccaatggtgggctggtctcttttgcc
aaagctgccgggtcccttgagagccttcaactggaagagtgccacatgattacccaagtt
ggtctttttggtgcacttttaaactgtggtgcaaaattgaaggcccttgctatggtgaat
tgcctgggtatgaaggatctaaatatgggattgcatctgccatctccttgcaactccctg
agatcgttgtccatccgtaactgccctgggtttggtaatgctagcgtggcaatgctgggg
aagctatgccctcaactgcagcatttagacctgagtgggctccagggaataacagatact
gggtttctccccctgcttgaaagctgtgaagctggtctggtaaaggttaatctcagtggt
tgtgtgaatctgactgacaaagtggtttcatccttggttgagttgcatgggtggactctt
gaagtgctaaattttgatggttgtcgcaagatcagtgatgctagtttagttgcaattgcc
gataactgcccgttgctcagtgatcttgatgtttctaagtgtgcggtcacagattgtggg
attgcagccctggcccaggcaaaccaattcaatctccagatcctctcagtttcagggtgc
cctttggtgacagacaaaagcttgcctgccttggaaaaactgggtcagagtcttttgggg
ttgaatctccaacactgcaatgcaatgggcatcagcacagttgatctgcttgtggatcag
ctatggaggtgtgacatcctttactaa
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