Carya illinoinensis (pecan): 122315683
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Entry
122315683 CDS
T08745
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cill01002
]
122315683
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122315683
Enzymes [BR:
cill01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122315683
Peptidases and inhibitors [BR:
cill01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122315683
Ubiquitin system [BR:
cill04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122315683
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
122315683
NCBI-ProteinID:
XP_042987692
LinkDB
All DBs
Position
7:complement(37023623..37032012)
Genome browser
AA seq
1119 aa
AA seq
DB search
MRDFGYFLGFPGLVLVACLVAPVIGFIIRRKWQHALARKEEIKRLLVLASDEAARAELEA
TAGYGFGADRAVPISTSYYQCAVCYSPTTTRCARCKAVRYCSGKCQIIHWRQGHKEKCHP
PNITQQMNDVGSKVTDQDGHEINCDSFETEGRCCPNPIETFPGERVFSNPGGSPESPHVK
VDDTKAEFLQDNKGTNSDSETSSMSFSGFSASTTNGESDDVSVGESTDSNESGGSYVRLS
VDNPIDRSGTSFITKNMNQSQPLSPKFASLVYSVDRPTKVSNLNQTKSDCSDGENECTST
SSSGLGSILLCEDSNAKHGRVSSSFWGTILDSTGSTIDASDKSAPSNSHGFGDAKLSHSG
SVLRFSFNLSETTPLREQGAKGILADDALPPASQITKFVHGAASSENISADAPKVVKHSA
SLNHGGSGRTDNETSCEVKSMPSSSSHIHLSSSIIGNSRSTDALNVSNLPSLRSESLKRG
ADDPASISHLLKSRDVGCLSSSAFDVHLASSAQGSSVPVIKPGKVDGVHTSAAVCSLVRS
SSPNARSGLRKVVDQFRVSKLSKDDLVGNGGGVSGRYTNKGIFPYELFVKLYNWNKLELR
PCGLINCGNSCYANAVLQCLAFTPPLTAYFLQGLHSKACVKKEGCFTCEFESLILKAKEG
NSPLTPIGILSQLQNIGSQLGHGREEDAHEFLRYAIDTMQSVCLKEAELDASGSQEEETT
LIGLAFGGYLRSKIKCTKCQGKSERQERMMDLTVEIEGDIGTLEEALHQFTGTEVLDGEN
KYQCGRCKSYERAKKKLTIMEAPNILTIALKRFQSGKFGKLNKSIRYPEILDLAPFISGT
SDKSPIYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFKIDDSTVTPVELERVLTKGAY
MLLYARCSPRAPRLIRNRITSSDPRYKAIPSWINGKNTTSKSRAAQIFPSSIPRDSCTSF
GSFDSKFIQLQRILVEDSSSDNSSLISSNSDEGSCSTDSTRDSTSTDELSDFIFGDSGQR
WNSPSDSDTSSTSSSPSPTPSPLRHSPPSYSEQYATHGSQAEGNVPFLHSDTTRNCRKLV
TSSSSNSCRETDSQRLGSNPFRDVNSGISFRKSTRERTD
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgatttcgggtattttttagggtttccgggcctggtgcttgttgcgtgcctggtc
gccccggtgatcgggttcataattcggagaaaatggcagcacgccttggccagaaaggag
gagatcaagcggctattggtgctagcctccgatgaggcagcaagagccgagcttgaggcg
accgctgggtatggtttcggtgccgaccgtgccgttccgatttcaacgagttattatcag
tgcgccgtgtgttattcccctaccactacccggtgtgcccggtgcaaggccgtccgctat
tgctctggaaaatgccagataatccactggcgacaaggtcacaaggagaaatgtcatcct
cccaatatcactcaacagatgaatgatgtgggaagcaaggtgacagatcaagatggccat
gaaatcaattgtgacagttttgagactgaaggcaggtgttgcccaaacccaatagaaaca
tttcctggggaacgtgttttttctaatcctggtggctctcctgaatctccacatgtgaag
gttgatgatacaaaagctgagtttctacaagataataaaggaactaattctgattctgaa
acatccagcatgtcattttctggattttctgcttcaactaccaatggcgaatctgatgat
gtttctgtgggtgagagcacagattcaaatgagtctgggggatcatatgtacgtctctct
gttgataatcccattgacaggtccggtacctcttttattactaagaacatgaatcaaagc
cagccattgtcccctaagtttgctagtttagtttattctgttgatcgtcctaccaaagtc
agtaacttaaatcagactaaatccgattgtagtgatggagaaaatgagtgcacatcaacc
agttcgtcaggtttgggaagtattctcttgtgtgaggattcaaatgccaagcatggtaga
gtgtcttctagtttctgggggacgattctcgactccactgggtccacaattgatgcatct
gacaaatctgctccatcaaattcccatggatttggtgatgccaaattatctcattctgga
tctgtcttacgtttttcattcaacttgtctgaaactactcctttacgtgaacaaggtgca
aaaggcattctagcagatgatgctcttccacctgcttcacaaatcactaagtttgttcat
ggagcggcttcatcagaaaatattagtgctgatgctccaaaggtggtcaaacactctgca
tcattgaaccatggaggatctggtcgtacagataatgaaactagctgtgaagttaaatca
atgccatcttcctcttcacatattcatctttcttcaagcattattgggaattcaagaagt
acagatgctttgaatgtcagtaacttgccgtctttgagatctgaaagtttgaagcgcggt
gctgatgaccctgccagtatttcccatctcttgaagtccagagacgtgggatgtttatca
tctagtgcatttgatgttcatttagcctctagtgctcaagggtcttcagttcctgtgatt
aaacctggaaaggttgatggtgttcacactagtgctgctgtatgctctctggtcaggagt
tcttctccaaatgctaggagtggcttaaggaaggttgttgatcagttcagagtatctaaa
ttgtcgaaagatgacctagtgggcaatgggggtggggtttctggaagatacaccaacaag
ggaatctttccatacgagctgtttgtcaagctctataattggaacaagttggagttgcgt
ccctgtggtcttataaattgtgggaacagctgttatgctaatgctgtgctgcagtgcttg
gcatttacccctcctctaactgcttattttcttcaggggcttcattcaaaagcatgtgtg
aagaaagaagggtgtttcacctgtgagtttgaaagtttaatattaaaggcaaaggaggga
aattctccactcactcctattgggatactttcacaactacaaaatattggaagtcagctt
ggtcatgggagagaagaagacgcccatgaattcctgaggtatgccattgatacgatgcaa
tctgtttgcctcaaggaagctgagctagatgcatcaggctctcaggaagaagaaaccact
cttataggccttgcatttggaggttacctccgatccaagattaagtgcacgaagtgccaa
ggcaagtccgagcggcaggaaaggatgatggatcttaccgttgagatagaaggagatata
ggaaccctggaagaggcccttcatcaattcacgggtactgaggttttggatggtgaaaac
aagtaccaatgtggcagatgcaaatcttatgagagggcaaagaagaaactaacaataatg
gaggctccgaatatccttacaattgcgctgaagcgctttcagtcaggtaaatttgggaag
ctcaataagtcaattcgatatcctgagatcctggacttggcaccatttattagtgggaca
agtgataaatcaccaatatataggctttatggagtggtggtccacctggacatcatgaat
gcatccttttctggtcattatgtgtgctatgttaagaatgtccaaaacaagtggttcaag
attgatgacagcactgtaacgcctgtggaacttgaaagggtcctgacaaaaggggcatac
atgcttctatatgccaggtgctcaccaagggctccccggttaataaggaacagaataaca
tcttctgaccccagatataaggccatcccttcctggatcaatgggaagaacactacatcc
aaatcaagggctgcccagatctttcccagttcgattcctcgagacagttgcaccagcttt
ggatcttttgactcaaagttcatccagcttcaaagaatactagtagaggactcatcaagt
gataattcttcccttatcagtagcaactcagatgaaggttcctgcagcactgatagcacc
cgcgattctaccagcaccgatgaattatccgacttcatatttggtgattcaggacagaga
tggaacagtccttcagattccgatacttcatctacatcttcatctccctctcccactccc
tctccattgaggcattcgcccccttcttattcggagcagtatgctacccatggatctcaa
gctgagggaaatgtcccgtttttgcattcggatacgactagaaattgtagaaagttagtg
actagcagtagtagtaatagttgtagggagactgactcacagagattaggatctaaccca
ttccgcgatgtaaactcaggtatatcttttagaaaatcaaccagggaaagaacagattaa
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