Carya illinoinensis (pecan): 122315717
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Entry
122315717 CDS
T08745
Name
(RefSeq) RNA-binding protein BRN1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cill03041
]
122315717
Spliceosome [BR:
cill03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122315717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RBD_DGKtheta
BRAP2
RRM_MARF1
Motif
Other DBs
NCBI-GeneID:
122315717
NCBI-ProteinID:
XP_042987755
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All DBs
Position
7:complement(27803012..27807093)
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AA seq
436 aa
AA seq
DB search
MAEGKRERRATSEESVKLFVGQVPKHMTEAQLIAMFKEFALVDEVNIIKDKATRTSRGCC
FLICPSRQEADKAVNACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEV
SDLFSEYGTIKDLQILRGSQLTSKGCAFLKYETKEQAISALEAINGKHKMEGSSVPLVVK
WADTEKERQARRAQKAQSQASNMPNTDLQHPSLFGTLPMGYVPSYNGYGYQAPGTYGLMQ
YRLPPMQNHSGFHNIIPTINQGNALRGVTPDLGTNMTPRNYAMPPASYVGSAYHGIPGLQ
HHVAYPGGMMSHRPLSASLGSVPPAVVNSNPTASSNTGKSSGGQVEGPPGANLFIYHIPQ
DFGDQELANAFQAYGRVLSAKVFIDKATGVSKCFGFVSYDSPEAAQSAITVMNGFQLGGK
KLKVQLKRDNKEIKSY
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggaagagagagagaagagcaaccagcgaggagagcgtgaagctgttcgta
ggtcaggtgccgaagcacatgaccgaggctcagctcatcgcaatgttcaaggagttcgct
ctcgtcgacgaggtcaacatcatcaaggacaaggccacgcgcacctcacgtggctgttgc
ttcttaatatgtccgtcgaggcaagaggcggataaggccgtcaatgcgtgtcacaacaag
aaaactctccctggggcatctagcccgttgcaagtgaagtatgcagatggcgagttggaa
agactagaacacaagctctttgttggcatgcttccaaagaatgtttcggaagctgaagtt
tctgatctcttttctgaatatggaactataaaagacttacagatattaagaggttctcag
ctaactagtaaaggttgtgcatttttaaagtatgagaccaaagagcaagcaatatctgct
ttagaggctatcaatggaaagcataaaatggagggatcaagtgtgcctttggttgtcaaa
tgggcagatactgaaaaagaaaggcaagctcggagggctcagaaagctcaatctcaagct
tctaatatgccaaatactgatttacagcatccttcattgtttggaactttgccaatgggt
tatgttccttcatataatggatatggctatcaggctcctggaacttatggacttatgcaa
taccgcctgccaccaatgcagaatcattctggatttcataatatcattcccacaataaac
caaggaaatgccttgcgtggagttacgcctgaccttggcactaatatgacccctagaaat
tatgctatgcctcctgcaagttatgtgggctctgcttatcatgggataccaggtcttcag
catcacgtggcatatcctggtggaatgatgagtcatcggcctctaagtgcttcacttggg
tcagtgccacctgctgttgtgaacagtaatcccacggcatcttcgaacactggtaaaagt
tctgggggtcaggttgaaggtccacctggcgccaatctatttatttatcacatacctcaa
gattttggagatcaagagcttgccaatgcttttcaggcatatggtagggtcttgagtgct
aaggtttttatcgacaaagcaactggtgttagcaaatgttttgggtttgtcagctatgac
tcacctgaggctgctcaatctgccattaccgtgatgaatggattccaattaggtggtaaa
aaattaaaggttcagcttaagagagataataaagagattaaatcatattga
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