Carya illinoinensis (pecan): 122315725
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Entry
122315725 CDS
T08745
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cill01001
]
122315725
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cill04121
]
122315725
Enzymes [BR:
cill01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122315725
Protein kinases [BR:
cill01001
]
Serine/threonine kinases: Other
Other
122315725
Ubiquitin system [BR:
cill04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122315725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
Beta-prop_WDR5
Beta-prop_THOC3
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
LisH
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
LisH_PAC1
Motif
Other DBs
NCBI-GeneID:
122315725
NCBI-ProteinID:
XP_042987771
LinkDB
All DBs
Position
7:42183026..42192618
Genome browser
AA seq
1958 aa
AA seq
DB search
MEAAMDDQADQPQAEARDPTAESQPEEDDVEEEARNEDDELIAKAQKLMEKITSSPEKPS
AFVLHALASLLETQESQYMEENGHSSTNGRASHNVGRLGNLVRHLFPWTVHLSNIIQNTY
FIEKTRYPPSIQAAAARLVLSCSLTWTYPHVFEEAVLENIKNWVIDDTTRFPREDHNCKG
KEASDYEMLKTYSTGILAVCLSSGGHVVEDVLTSGLSAKLMRYLRVHVLGEMSTSQKDAA
HLTNGKIASGATCIRGRDEGKIRVQQAPETTYLDGLRIADERSLDDQSLERDQDRNIVLQ
GHGEECRINEGERPDALDERVDAYEIDADGDNRRLSRELRDGKAKLEDFDENGRDDSSRR
RANRGLARSRCKGRFNEGGPENEQALTSPGSGSRLGQGRSTRERSVSRHSDVKKLPDARK
TCGRITFDALVVERDDNDDCFQECRVGNKDISDLVKKAVRAAEDEARTANAPAEAIKAAG
DAAAEVVKSAAFEEFKTTKDEEAAVLAASRAASTVIDAANSIEVSRSSSSINNNSLNLHY
TETETSEDVEEYFILDSESLAQLREKYCIQCLGILGEYVEVLGPVLHEKGVDVCLALLQW
SSRNEEESKAAILLPDVMKLICALAAHRKFAALFVDRGGMQKLLGVPRVAQTFFGLSSCL
FTIGSLQRIMERVCALPSDVVHQVVELAIQLLECPQDQARKNAALFFAAAFVFRAVLDAF
DAQDCLQKLLGLLNDAALVRSGVNTGALGLSSSGSFRNDRSPAEGLTSSEKQIAYHTCVA
LRQYFRAHLLLLVDSIRPNKNNRSTARNTPSVRAVYKPLDISNEAMDAVFLQLQKDRKLG
PAFVRTRWPAVEKFLSSNGHFTLLELCQALPVERYLHDLLQYALGVLHIVTLVPNSRKMI
VNATLSNNCVGIAVILDAANSASSYVDPEIIQPALNVLVNLVCPPPAISNKPPILAQGPH
SVSTPTSYGSGMENRDKNTERNVSDQAVNMSGQSDPRERNGESSVVDRGNATGVGTQYIS
STSQSPIPTATSGLVGDRRISLGAGAGCAGLATQLELGYHQAREAVRANNGIKVLLHLLQ
PRIYSPPAALDCLRALACRVLLGLARDDTIAHILTKLQVGKKLSELIRDSGGQTCGTEQG
RWQAELSQAAIELIAIVTNSGRASTLAATDAATPTLRRIERAAIAAATPITYHSRELLLL
IHEHLQASGLGATAATLLKEAQLTPLLFLAAPSSLAHQTSAPEVPSIQLHWPSGRAPCGF
LTEKPKLTAENEDTSLKCDSTVSSSKKNSLAFSPIFGIHSRTQLQSHDCQPVSVRRIFST
SKQSSVPAIASETSSESLPKPNFDTESQCKTPIILPMKRKLSELKDVGLVSSPGKRLNTG
EQGLRSPVCPTPSSGRQSNLLTDNIGLSTPSSIVRDQHWQSMPIGGVAGYKDDNQHGNTH
MGQATPSSQLGILNDPQPSSTEQLTLDSIVVQYLKHQHRQCPAPITTLPPLSLLHPHVCP
EPKRSLDAPSNVAGRLGTREFKSIYGGVHGNRRDRQFVYSRFRPWRTCRDDAVALLTCID
FLGDSSRLAVGSHSGELKIFDSNSNNVLESCTSHQSPLTSVESYISGETQLVLSSSSQDV
RLWDATSISGGPMHPFEGCKAARSSNSGSIFAALTVEPAPREILLYNIQTCQLESKLSDT
SASSTGRGNVYSLIHFSPSDAMLLWNGVLWDRRVSGPVHRFDQFTDYGGGGFHPAGNEVI
INSEVWDLRKFRLLRSVPSLDQMTVTFNARGDVIYAILRRNLEDVMSSVHTRRVKHPLFA
AFRTVDAVNYSDIATIPVDRCVLDFATESTDSFVGLITMDDQEEMYSSGRVYEIGRRRPM
DDDSDPDDAESEEDEDDADVDPILGPDLDGDGESDADDLSNDDSVSELIDDDDDDGDFML
EGGTGLLEIVTEGDEDSELLESFSSDDEDDFVGNGFGY
NT seq
5877 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccatggacgaccaagcggaccaaccgcaagcagaagctcgggatcctacc
gcagaatctcagcctgaggaagatgacgtagaagaggaagcaaggaacgaagatgatgag
ttgatcgcgaaggctcagaagctgatggagaagatcacttcttcgcctgaaaaacctagc
gccttcgtcctccatgccctcgcctccctccttgaaacacaagaatctcaatacatggaa
gagaatggtcattcatccactaacggtcgtgcttcacataacgttggacggcttgggaac
ctagtccggcacctcttcccctggacagtgcaccttagcaacatcatccagaacacctac
ttcattgagaaaacaagatacccaccctccatccaggcagctgctgcaaggcttgtttta
agctgctcactgacttggacttatcctcatgtttttgaagaagctgtcttagagaacata
aaaaattgggtgattgatgacaccacaagatttccccgtgaagaccacaactgcaagggc
aaggaagcatctgattatgaaatgttgaagacctattccaccggaattcttgccgtttgt
ttgtccagtggtggtcatgtagtcgaagatgtgttgacatctggcttgtctgccaagctt
atgcgctatcttcgggtgcatgtccttggagagatgagtacaagccagaaagatgctgct
catttaacaaatggtaagattgcatctggtgctacttgcataagaggtagggacgaaggc
aagattagggttcagcaagctccggaaacaacttatttagatggcttaaggatagcggat
gagagatccttagatgaccaaagtcttgaaagggatcaggatagaaacattgttctgcaa
ggacatggagaagaatgcaggataaatgagggagaaagacctgatgcattggatgaaagg
gttgatgcctatgagatagatgctgatggcgataataggaggcttagtcgagaattacgt
gatgggaaggcaaaattggaagattttgatgagaatggtagggatgactcttcaaggcgc
agagcaaatcgtggattggcaagatcaagatgcaagggaaggttcaatgaaggtggccct
gagaatgaacaggctttaacctcaccaggatctggtagtcgattgggacaggggcggagt
acaagagagaggagtgtctcaaggcattcagatgtgaaaaaattaccagatgctagaaag
acttgtggcaggattacttttgatgctttggttgtcgaaagggacgataacgatgactgc
ttccaggaatgcagagttggaaataaagatatctctgatctagtaaagaaagcagttagg
gctgccgaagatgaagcaagaacagccaatgcacctgcagaagctatcaaagcagcaggt
gatgctgctgctgaagttgtcaaaagtgcggcttttgaggaatttaaaactaccaaagat
gaagaagctgcagtcttggctgcttccagagctgcatccactgttattgatgctgctaat
tcaatcgaggtttcaaggagctctagtagcatcaataataattcgctgaatctacattac
acagagacagaaactagtgaggatgtggaagaatatttcatcctggactcggaatctctt
gcacagctgagggaaaaatactgtattcaatgccttgggatacttggagaatatgttgaa
gttcttgggcctgtacttcatgagaagggcgttgatgtctgccttgcattattacaatgg
agttccagaaacgaggaggaatcaaaggctgcaattcttttgcctgatgtaatgaagcta
atctgtgcattggcagcgcaccgaaaattcgccgcattatttgtggatcggggtggcatg
cagaaactgcttggtgtccctagagttgctcaaacctttttcggtctttcttcctgcctg
tttactattggttctctccagagaataatggaacgtgtgtgcgctcttccctcagatgtt
gtacaccaggtggttgagttagctatccaacttcttgagtgccctcaggaccaagctaga
aaaaatgctgccttgttttttgctgctgcgtttgttttccgagcagttcttgatgccttt
gatgctcaggactgtttacaaaaattactggggcttctaaatgatgctgccttagttagg
tctggagtaaatactggggcgttaggtttgtccagttcaggatcatttcgaaatgatcgt
tcacctgcagaaggtctgacatcatcagagaagcagatagcttatcatacctgtgttgct
ttgcggcaatattttagagctcaccttcttttgcttgtggattcgatccgtccaaataaa
aacaatcgaagtacagctcggaatactccaagtgtaagggcagtctacaagccacttgat
atcagtaatgaagctatggatgcggtatttctgcagttacaaaaggatcgaaagctgggt
cctgcatttgtaagaactcgttggcctgcggtagagaagttcttgagctctaatggacac
tttaccttgttggaattgtgccaggccctccctgttgagcgctatttgcacgatttgctt
caatatgcattgggtgtgttgcatattgttacattagtacccaacagccgcaagatgatt
gtaaatgccacattaagcaataattgtgttggtatagcagtcattttggatgcagcaaat
agtgctagtagttatgtggacccagagatcatccaaccagcactaaatgtgttagtaaat
cttgtttgtcctccacctgcaatcagcaataaaccacctatacttgcacaaggtccacat
tctgtttctactccaacctcgtatggttctgggatggagaatagagacaaaaacacagaa
cgtaatgtctcagatcaagctgttaacatgtccggccagagtgatccaagggagcggaat
ggggaatctagtgtggtagataggggaaatgccacaggagttggtacccagtacatcagt
agcacttcacaatctcctattcccacagctacttcgggactggttggagatcgtagaata
tctttaggtgctggtgcaggttgtgctggccttgctacccaattggaactaggatatcat
caagcaagagaggctgtacgtgcaaacaatggtataaaggtcctacttcatctcctccag
ccacgtatatattcacctcctgctgcccttgattgtcttcgtgctctagcttgccgtgtt
ctacttggtctagccagagatgatacaattgcacatatattgacaaagctacaggttggg
aaaaagctatcagaactaattcgagattcaggaggccagacatgtggaactgagcaaggc
aggtggcaagctgaactttcccaggcagcaattgaactgattgcaattgtgacaaattca
gggcgtgcaagtacgttagcagctactgatgctgctacccctactttgaggcgcatagaa
agagcagctattgctgctgctactccgattacttaccattccagggaacttttacttcta
atccatgaacacctacaggcatctggtttgggtgcaactgctgctacactattaaaagag
gctcagttgactcctttgctgttcttggcagctccatcatctcttgcgcaccaaacctct
gcgccagaagtcccctctatacagctccattggccctctggtcgagccccttgtggattt
ctcactgaaaaacctaaactcactgcagagaatgaggatacaagcctgaagtgcgattca
actgtatcttcttcaaagaaaaattcactggctttctcaccaatttttggtatacactca
agaactcagttgcaatcccatgattgccaaccagtatctgtcaggagaatcttcagtaca
tcaaagcaatcttctgtacctgcaattgcatcagaaacttcatcagagtccttgccaaaa
cctaattttgatacagaatctcaatgtaagactccaattatattgccaatgaagcgaaaa
ttatcagagttgaaggatgtggggttggtttcatcccccggaaagcgacttaacacaggt
gagcaaggactccggtctccagtttgtccaacacccagtagtggccgtcaaagcaacctg
ctaactgataatattggactttctaccccaagttctattgtaagagatcagcattggcaa
tcaatgccaattgggggtgtggcaggttataaggatgataaccaacatggcaacacccat
atgggtcaggcgacaccatcctcacaacttgggattttaaatgatcctcagcccagcagc
acagagcagttaactctagattctattgttgttcagtatctgaagcaccagcatcgccaa
tgcccggcccctataaccactcttccgccactctctctcttgcatccacatgtttgtcct
gaacctaaacgaagtcttgatgccccatcaaatgtagcaggcagacttggtacacgtgag
ttcaaaagtatatatggtggggtacatggaaatcgcagggatcgccagtttgtttacagc
agattcagaccttggagaacttgtcgggatgatgccgtggcgcttttgacatgcattgat
tttcttggggactcctctcgtcttgcagttggcagccactctggagagctcaagattttt
gactccaacagcaacaatgtgctggagagctgcacaagccaccagtctcctttgacatct
gttgaatcatatatttctggtgagacgcagctggtgctttcatcgagctcccaggatgta
aggttgtgggacgcaacttcaatctcaggtggaccaatgcatccatttgaagggtgtaag
gctgcaaggtctagcaattctggaagcatttttgcagccctgacagtagagcccgcacca
cgagaaattctcctctacaatatccaaacctgccagctggaatcaaagctgtcagacacg
tctgcaagttctacaggtcgggggaatgtttattctctcatacacttcagcccttcagat
gctatgttgctatggaatggggtattgtgggatcggcgggtttctggccccgttcatcgc
tttgatcaatttacagattatggaggtggtggctttcatccagcagggaatgaggtaatt
ataaactcggaggtctgggatctccgaaagtttaggctcctccgcagtgtaccttcattg
gatcaaatgacagtaacttttaatgcacgcggtgatgtgatttatgcaatccttcggaga
aatcttgaggatgtaatgtcatctgttcacacacgtcgagtcaagcatcctctctttgct
gcttttcgcaccgtggatgcagtcaactactctgacattgccactatacctgtagatcgt
tgtgtcctagactttgcaacagagtcaacagattcctttgtagggttgattacaatggat
gatcaagaagagatgtactcttcaggaagagtttatgaaattggtcgcagaaggccaatg
gatgatgattcagatcctgatgatgcggagagtgaggaagatgaggatgatgctgatgta
gaccctattctaggcccagatcttgatggggatggtgaaagtgatgcagatgatttgagt
aacgatgatagtgttagcgagcttattgacgacgacgacgatgatggggatttcatgctg
gagggtggaacaggattactagagattgtgacagagggtgatgaggatagtgaattgctt
gaatctttcagtagtgatgatgaggatgattttgtgggtaatggttttggttattaa
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integrated database retrieval system
