Carya illinoinensis (pecan): 122315727
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Entry
122315727 CDS
T08745
Name
(RefSeq) heat stress transcription factor A-5-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
cill
Carya illinoinensis (pecan)
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cill03000
]
122315727
Transcription factors [BR:
cill03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
122315727
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GFIT
Motif
Pfam:
HSF_DNA-bind
DUF3450
TMF_TATA_bd
Rmp24-like
Motif
Other DBs
NCBI-GeneID:
122315727
NCBI-ProteinID:
XP_042987778
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Position
1:33844124..33846873
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AA seq
485 aa
AA seq
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MDGGPTTSGSGVGGPAPFLIKTYDMVDDSETDEIVSWSSHKASFVVWNPPEFSRLLLPTF
FKHNNFSSFIRQLNTYGFRKIDPERWEFANEDFVKDEKHRLKNIHRRKPIHSHSNSQGSV
VHPERAALNDEIERLMRERATLEANVLRSKQHRSAAKFHYEDLKQLMDNMERRQEKLLAS
LDKALQNPSFVEILVQKIESMGFSAYNKKRRLPQVDHSQPVVVNSFVDNHSSSRSGFGND
SHQFSNKVRLELSPAVSDINLVSHSAQSSYEDGACLQRKASNEEPKGGQTRTEGFVFPRE
LLELSDAGTSFTLKMNSSLSQRVPTNEAPRPQHLQPSLDSNEEGDSHISFHLNLTLASSP
LQVNKSPYSERMPQLIQEIGKSRDSKSKTNGEESDTTTTPMRKYQADDTDLSSSQRVPIN
DQAPAVASVRINDVFWEQFLTERPECLDNEEASSTYRSNPYDEQEGGSSGLGMSGKTKNT
EQLTL
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggacggtggtccgactacgagcggtagcggagttggtggtccagcgccgtttctgata
aagacgtacgacatggtggacgactcggagaccgacgagatcgtgtcgtggagctcccac
aaggccagcttcgtggtctggaacccgcccgagttctcccgcctcctcctccccaccttt
ttcaagcacaacaacttctccagcttcatccgccagcttaatacctacggatttcgaaag
attgatcctgagagatgggagtttgccaatgaagattttgtgaaagatgagaaacatcgt
cttaaaaatatccaccgcagaaaacctattcacagccacagtaattctcaaggttctgtg
gtgcatccagaaagagcagctcttaatgacgagatagagaggcttatgcgtgagagagct
acacttgaggcaaatgttttaaggtcaaaacaacatcgatcagctgcaaagtttcattat
gaagacctaaaacaactcatggataacatggagcggaggcaggagaagttgctggcctcc
ttggacaaggctcttcagaacccttcttttgtggaaattcttgttcagaaaattgaatct
atgggtttctcagcatataataagaaaagacgactgccacaggttgatcactcacagcca
gttgtagtgaacagttttgtggataaccatagcagttctagatctgggtttgggaatgat
tctcatcaattttcaaataaagtaagattagagttatcaccagctgtttcagacattaac
ttggtttcacatagtgcacagagttcctatgaagatggagcatgtctgcagagaaaagca
tccaatgaagaaccaaaaggtgggcagaccagaactgaaggatttgtctttccacgtgaa
ttattagaactctcagatgcaggaacgtcttttactctaaaaatgaattccagtttgtct
caaagggtgccaaccaacgaagccccgaggccacaacacttgcagccaagtttggactct
aatgaagaaggcgatagtcatatttccttccatttaaatttgaccctggcatcttctcca
ttgcaagtcaacaaaagtccttattcagaaaggatgccccaactaatacaggaaattgga
aagtcccgagattcaaagtctaagaccaatggtgaagaatctgatacgacaactactcct
atgagaaaatatcaagctgacgacacagatttatcttcctctcaaagggtaccaattaac
gatcaagcgcctgcagtggcttctgttagaataaatgacgtcttttgggaacagttccta
actgaaagaccagaatgtttggacaatgaagaggcaagttctacatatagatcaaatcca
tatgatgagcaagaagggggaagttcaggccttggaatgtccggaaagaccaagaacaca
gagcagctaactctttga
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