Carya illinoinensis (pecan): 122315773
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Entry
122315773 CDS
T08745
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03015
mRNA surveillance pathway
cill04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122315773
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
122315773
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cill01009
]
122315773
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cill03019
]
122315773
03036 Chromosome and associated proteins [BR:
cill03036
]
122315773
Protein phosphatases and associated proteins [BR:
cill01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
122315773
Messenger RNA biogenesis [BR:
cill03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
122315773
Chromosome and associated proteins [BR:
cill03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
122315773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
Phage_Inh_C
DUF4187
P2R3B_EF-hand
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-GeneID:
122315773
NCBI-ProteinID:
XP_042987851
LinkDB
All DBs
Position
7:complement(14263904..14292897)
Genome browser
AA seq
539 aa
AA seq
DB search
MNMEIGTDAALFDAEILQLPEVSPLTLKSNPAFVEKLFEQWLSLPDSNRQVTSLVNEAKA
GGPLNVPGNSSSPHASTSNILPSMFPAGSAPPLSPRSISGSPRIMKQRAGPSNLASPLKV
VSEPVKELIPQFYFQNGRPPPNELKEQCLFRANQFFSGHLDGLQMHEFKSVTKDVCKLPS
FFSTSIFRKIDSNSSGFVTRDAFLNYWVNGNMLTMDIATQIYTILKQPDVKFLTQDDFKP
VLRELLAAHPGLEFLQSTPEFQERYAETVIYRIFYYINRAGNGHLSLRELKRGNLIDAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVARKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTRNELQFFY
EEQLHRMECMAQEPVLFEDILCQIIDMIGPENESYITLRDLKGCKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggagatcgggacagatgcggcgttgtttgacgccgaaattctgcagctcccg
gaggtgtctcctttgaccctcaaatcgaatccggcctttgttgagaagctctttgagcag
tggctctcgctccccgactctaatcggcaggtaacatcattggttaatgaagcaaaggca
ggtggtcccttgaatgttcctggaaactcttccagtccacatgcttccacaagcaatatt
ttgccctcaatgtttcctgcaggaagtgcccctccgttgtcaccaagaagtatatctggt
tctcctcggataatgaagcagagggctggtccctcaaatttagcttcacccctgaaagtg
gttagtgagccagttaaagaattgatacctcagttttactttcaaaatgggcgtccacct
ccaaatgagctaaaagaacaatgtttatttagagcaaatcagtttttctctggtcacttg
gatggactgcaaatgcatgaatttaaatcggttactaaggatgtctgcaagctgccatca
ttcttctccacatccattttcagaaagattgatagtaatagctctggttttgtgacgagg
gatgcatttctcaattactgggtaaatggaaacatgttgacaatggatatagcaacccaa
atatatactattttgaagcaaccggatgtcaaatttcttacccaggatgacttcaaacca
gtgctgcgagaacttttggctgctcatccagggttggagttcttgcagagcacaccggag
tttcaagaaagatatgctgaaactgtaatatacagaatattttactacataaatagagct
ggaaatggtcatcttagcctccgggagctgaaacgtggtaacttaattgacgcaatgcaa
catgcagacgaagaagaggacatcaacaaagtattgaggtacttctcttatgaacatttt
tatgttatatactgcaagttttgggagctggatacagatcatgattttttgatcgacaaa
gagaaccttatcagatatggtaaccatgcgcttacctaccggattgttgatagaatattt
tctcaggttgcaaggaagttcactagtaaggttgagggaaagatggggtatgaagatttt
gtgtacttcatattgtcagaggaggataaatcatctgaacctagtcttgagtattggttc
aaatgcatcgatctggatggaaatgggattcttacacggaacgaactgcaattcttttat
gaggagcagttgcatcgaatggaatgcatggcccaagagcccgtgctctttgaggatata
ttgtgccaaataattgacatgattgggcctgagaatgagagctatatcacactgcgtgac
ctgaaaggatgtaaactctcaggaagtgtatttaatatcctttttaaccttaataagttt
atggcctttgaaactcgtgatccatttctcattcgccaggaacgcgagaatccaacattg
acagaatgggatcgctttgcgcatagagaatatattagactttcgatggaggaagatgtt
gaagatgcttctaatgggagtgcagaagtttgggatgaatcacttgaggctcctttctga
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