KEGG   Carya illinoinensis (pecan): 122315852
Entry
122315852         CDS       T08745                                 
Name
(RefSeq) splicing factor U2af small subunit B-like
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
cill  Carya illinoinensis (pecan)
Pathway
cill03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cill00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122315852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cill03041]
    122315852
Spliceosome [BR:cill03041]
 Complex A
  U2 snRNP components
   U2 related factors
    122315852
 Complex B
    122315852
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4
Other DBs
NCBI-GeneID: 122315852
NCBI-ProteinID: XP_042988038
LinkDB
Position
7:33009603..33014144
AA seq 277 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLLLSNMYLRPDMITP
GVDEQGQPIDPRKIQEHFEDFYEDIFEELSKFGEIESLNVCDNLADHMIGNVYVQFKEED
QAAAALQALQGRFYSGRPIIADFSPVTDFREATCRQFEENSCNRGGYCNFMHVKLIGREL
RRKLFGRFRGYRISRSRSRSSSPRHRREHRDYRDRDRDYGGNVKRLSKDRYDRDGGGAGR
RRHATPRRSRSPVTGREGSEERRARIEQWNREREEKQ
NT seq 834 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttcgatcttcggcaccgaaaaggaccgggtcaactgccccttc
tacttcaagatcggtgcttgtcgccacggcgatcgctgttctcgcctccacaatcgcccc
acgatctctccgacactactcctgtcgaacatgtacctgcgcccggacatgatcaccccg
ggcgtggacgagcagggccagcccatcgacccccgcaagatccaggagcacttcgaagac
ttttacgaggacatcttcgaggagctcagcaagttcggcgagatcgagagcctcaacgtc
tgcgacaacctcgccgaccacatgatcggcaatgtctacgttcaattcaaggaggaggac
caggccgcagccgccttgcaggcccttcagggccgtttctactcaggccgccccatcatc
gccgatttttcgccggtcaccgatttccgcgaggccacgtgtcggcagttcgaggagaac
agttgcaaccgaggcgggtactgcaacttcatgcatgtgaagctgattggaagagagcta
aggaggaagctttttggaaggttccgtgggtataggattagccggagtcgtagccggagt
tcgagcccccgtcataggcgagagcatagggactatagggaccgggatcgtgattatgga
gggaatgtgaagcgattgagcaaggacaggtatgacagggacggtggtggtgctggaagg
agaaggcatgctaccccgaggcggagcaggagccccgtaaccgggagggaaggtagtgag
gagcggcgagctagaattgaacagtggaatcgagaaagggaggagaagcagtaa

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