Carya illinoinensis (pecan): 122315908
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Entry
122315908 CDS
T08745
Name
(RefSeq) DNA mismatch repair protein MLH3 isoform X1
KO
K08739
DNA mismatch repair protein MLH3
Organism
cill
Carya illinoinensis (pecan)
Pathway
cill03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cill00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
122315908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cill03400
]
122315908
DNA repair and recombination proteins [BR:
cill03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
122315908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
122315908
NCBI-ProteinID:
XP_042988160
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Position
7:464290..475730
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AA seq
1212 aa
AA seq
DB search
MRSINPLPGAVRSSVRSGVILFDLPRIVEELVFNSLDAGATKVSVYVGIGTCSVKVVDDG
SGIPRDGLVLLGERYATSKFHQLADMDDASGSFGFRGEALASISDVSVLEIVTKAFGRPN
GYRKVIKGCKCIYLGIDSDRKEAGTTVNVRDLFYNQPVRRKYMQSSPKRVLHSVKKCVLM
IALVHSQISFKVIDNESGDELLCTHPSSPLSLLKSEFGVEVPDSLHELNVSDDILKLSGY
VSGPCDGSEIKAFQYVYINSRFICKGPIHKLLNQLAIQFDCLDPWKINSQKQKRSRSQPY
PAYILNLSCPRSLYDLTFEPSKAKVEFKNWAPILTFTEKAIQRFWNDNLTLRIDLSETSE
IAKKKGRVKNHKASLDIFSSPSEMLKEFDHLSDIEHDGIPCTNLHKNSAAFKEQQNEMGF
VCQNDYAFQSWDGLETKCIPSATCKYENHLLTSDNNFLSIEDNCLKNRSNDDVENSLSSA
WGVEFLKVDPVASSELAGTALSCDLVGRDIEKPFLQVCSSQQRLPLERALFANDDGYEFQ
RDGFRTNWKQRIAHDSVDVLEFEGTKQSFDLLPRTQWQEDASCSQSFTREIKKVDVPAHF
DFPSRAFAKSIPSYAEHFIEEDVLEYDSVVRHLGKLGSSHSDWCPLASESLFLAAPWDFE
HLRDENALKESPHSGESAGYGHLVSQGKSDCKSGFHITPKGSRQKYCTSTCLYNKVDFDD
YACFSRNSCKFFPRVNQEYKFSLECANILPDDTGWLNLESEAKDYTRVDKYESQRDTMGY
QDSEQDCVPKKRSRRGLSAPPFYRGKRRFFSLNCPSIMNAGKPGAKIFHNALSYPEDDMP
KHAKQPSGAHHLYFKPSSMEHLLSDNSLAFRLDVEKMTSISANLKEKEEGDTVEQSCYFG
SQDMAPVFFSKKTQDSVNSWSKWRSFSSKITNKNKSCDTNNESHILDISSGFLHLAGDSL
VPESINKNCLGNAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRKKVFSGEAKT
INYLKIEQELILPEIAYQLLQNYAEQIKDWGWICNIHGQDSRSFKWNLNLLHRRPIVVTL
LAVPNILGVNLSDVDLLEFLQQLADTDGSSTMPPSVLRVLNMKACRGAIMFGDSLLPSEC
SLIVEELTQTSLCFQCAHGRPTTIPIVNLEALHKQTAKLGSLGDNPNKLWHGLHRQELSI
DRAAQRLGSARA
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcatcaatcccttgcccggggcagttcgtagctcggtgcgctctggcgttatc
ctctttgacctgccaaggattgtggaagagctggtttttaacagtctggatgccggcgcg
acgaaggtatcagtttatgtagggattggcacctgctcagtaaaagtagtagatgatgga
tctggcattcctagggacggattggtgttgttgggagaaagatacgcgacatcaaagttt
caccagttggctgatatggatgatgcaagtgggagctttggctttcggggagaagcattg
gcttccatttctgatgtttcagtgttggaaattgtaacaaaagcttttgggaggccgaat
ggatatcgtaaagtcataaagggatgcaagtgcatatatcttggaattgacagtgatagg
aaggaggcaggcaccacagttaatgtccgcgatttattttacaaccaaccagttcggagg
aaatatatgcaatccagccccaagagggtgttgcactcagtcaagaaatgcgtccttatg
attgcccttgtccactcacagatttccttcaaagtcattgataatgaaagtggggacgag
cttctttgcactcatccttcttctcctttgtcactattgaaaagtgagtttggggttgaa
gttcctgactctcttcatgaattgaacgttagcgatgatatattaaagctatctggctat
gtatctggcccctgtgatggttctgaaattaaggcctttcaatatgtctatattaactca
cggttcatttgcaaaggtccaattcataaactgcttaatcaattggccattcagtttgac
tgtttggatccatggaaaatcaattcccaaaagcagaaaagaagtaggtctcaaccttat
ccagcttacattttgaatctaagctgccctcgttctttgtatgatttgacctttgaacca
tcaaaggcaaaagttgagttcaagaattgggctcctatacttaccttcactgagaaggcc
attcaaagattttggaatgacaatctaactcttcgtatagacttgtcagaaacctctgaa
attgcaaaaaagaagggccgggtaaaaaatcataaagcttctcttgacattttctcttcc
ccttcagagatgctcaaagagttcgaccatttgtctgacatagaacatgatggaattcct
tgcacaaacctgcacaaaaattctgctgcgtttaaagagcagcaaaatgagatgggattt
gtttgtcaaaatgattatgctttccaatcatgggatggtcttgaaaccaaatgcataccc
tcagcaacatgtaagtatgagaaccatctgttgacatctgataacaattttctatccata
gaggataattgcttgaagaatagatccaatgatgatgtggagaacagtttaagctcagca
tggggagttgagttccttaaagttgatccagttgcaagcagtgaattggcagggactgca
ttatcttgtgacttggttggcagggacatcgagaaacctttcctgcaggtttgctcctca
caacaaaggctgccccttgagagggctttgtttgcaaatgatgacggatatgaatttcaa
agggatggcttcaggaccaactggaagcaaagaattgctcatgacagtgttgatgttctg
gaatttgaaggcactaaacagagttttgatttacttccaaggacccagtggcaagaagat
gcatcatgttctcagtcctttaccagagaaattaaaaaggttgacgtgcctgctcatttt
gattttccatcaagagcttttgcgaagtcaatcccatcttatgcagagcatttcattgaa
gaagatgttcttgaatatgattcagtcgtcagacacttggggaaattaggctctagtcat
tctgactggtgtcccctggcctcagagtccttatttctggccgctccttgggattttgag
catttaagggatgaaaatgcactcaaggagagtcctcactcaggtgaaagtgctggttat
gggcatcttgtgtctcagggaaagagcgactgcaaatctggtttccatatcacgccaaag
ggctctagacagaaatattgcacctccacttgtctgtataacaaagtagattttgatgat
tatgcttgttttagtagaaattcctgcaaattctttccaagagttaatcaagagtataaa
ttttctcttgaatgtgcaaatatattgccagatgatacaggctggttgaatctggaatca
gaagctaaagattacacacgtgttgacaaatatgaaagccaaagagatacaatgggatat
caagattctgaacaggattgtgttcctaaaaaaaggtcaagaagaggcctttcagctcca
ccattttacagagggaaaaggaggttcttttccttaaattgtccttcaattatgaatgcg
ggaaaacctggagccaaaatctttcacaatgctctttcttatccagaagatgatatgccg
aaacatgccaaacaaccttctggtgctcatcatttatatttcaagccaagttctatggag
catttgttgtcagacaatagtcttgctttcagactggatgtggagaagatgacaagcatt
tcagcaaacttgaaggagaaggaagaaggtgacactgttgaacagtcctgttattttggc
agtcaagacatggctccagtcttcttctcaaagaaaactcaagattccgtgaattcttgg
tctaaatggcggagtttctcttccaagataacaaacaaaaataaatcgtgtgataccaac
aatgaaagtcatatacttgacatctcttccggattcttgcatcttgctggtgattcttta
gttcctgaatctatcaacaagaactgcctaggtaatgccaaagttcttcagcaggtggat
aagaaattcattccggttgtggctggtggaacgcttgctgtcattgaccagcatgctgca
gatgaaaggatccgactggaagaactacgcaagaaggtgttttctggagaagcaaagacg
attaattatcttaaaattgagcaagagttgatcctgccagaaatagcctatcagttgctg
caaaattatgctgaacagataaaagattggggttggatctgcaacatacatggtcaagat
tcaaggtctttcaagtggaatttgaatcttctccacaggcgtccaatagttgtcactctt
cttgcggtaccgaacattttaggtgtcaatttgtctgatgtagatcttttggaatttctt
cagcagcttgctgatacggatggatcatcaacaatgccaccatcagtcctccgtgtcctt
aatatgaaagcatgcagaggtgcaattatgtttggggactctttgttaccttcggaatgc
tccctcattgtggaagagctaacgcagacctcactttgtttccagtgtgctcatggacga
ccaacaactatccccattgtcaacttggaggccttgcacaagcagacagctaagctcgga
tctttgggtgataacccaaacaagttgtggcacggtttacatcgacaagaacttagtatt
gatcgtgcggcacagcggttaggttctgctagagcttag
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integrated database retrieval system
